Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Z98882.1-201ENST00000622160 2253 ntBASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 AC073210.2-201ENST00000430369 194 ntBASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM48Q8IWZ4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 CD99P1-205ENST00000527459 561 ntBASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 AC100791.3-201ENST00000617619 330 ntBASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM48Q8IWZ4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 AL355472.2-201ENST00000422958 438 ntBASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 KRT18P6-201ENST00000555540 1265 ntBASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRIM48Q8IWZ4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TRIM48Q8IWZ4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM48Q8IWZ4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 AC097658.1-201ENST00000475555 843 ntBASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 CYP2T3P-201ENST00000601990 817 ntBASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM48Q8IWZ4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms