Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.53■□□□□ 0.72
RAB43Q86YS6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RAB43Q86YS6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RAB43Q86YS6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB43Q86YS6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB43Q86YS6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB43Q86YS6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
RAB43Q86YS6 CDV3P1-201ENST00000471403 739 ntBASIC19.52■□□□□ 0.72
RAB43Q86YS6 AC026310.3-201ENST00000625186 2373 ntBASIC19.52■□□□□ 0.72
RAB43Q86YS6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB43Q86YS6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB43Q86YS6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.52■□□□□ 0.71
RAB43Q86YS6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB43Q86YS6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB43Q86YS6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 POU5F1P3-201ENST00000428824 1078 ntBASIC19.51■□□□□ 0.71
RAB43Q86YS6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB43Q86YS6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RAB43Q86YS6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB43Q86YS6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB43Q86YS6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB43Q86YS6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB43Q86YS6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RAB43Q86YS6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB43Q86YS6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB43Q86YS6 LSM12P1-201ENST00000411836 588 ntBASIC19.49■□□□□ 0.71
RAB43Q86YS6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.49■□□□□ 0.71
RAB43Q86YS6 FAM21FP-204ENST00000608637 956 ntBASIC19.49■□□□□ 0.71
RAB43Q86YS6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB43Q86YS6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB43Q86YS6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB43Q86YS6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAB43Q86YS6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB43Q86YS6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms