Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 AC087289.5-201ENST00000586076 3175 ntBASIC18.5■□□□□ 0.55
SHFQ7M4L6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 AL355001.2-201ENST00000620617 1191 ntBASIC18.5■□□□□ 0.55
SHFQ7M4L6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHFQ7M4L6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHFQ7M4L6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHFQ7M4L6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHFQ7M4L6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.5■□□□□ 0.55
SHFQ7M4L6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHFQ7M4L6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SHFQ7M4L6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SHFQ7M4L6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.49■□□□□ 0.55
SHFQ7M4L6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SHFQ7M4L6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 RASA4CP-201ENST00000424092 1398 ntBASIC18.49■□□□□ 0.55
SHFQ7M4L6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.49■□□□□ 0.55
SHFQ7M4L6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHFQ7M4L6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 AP001330.3-201ENST00000520123 633 ntBASIC18.48■□□□□ 0.55
SHFQ7M4L6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.48■□□□□ 0.55
SHFQ7M4L6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHFQ7M4L6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.47■□□□□ 0.55
SHFQ7M4L6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHFQ7M4L6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms