Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 AC099778.1-201ENST00000568593 1911 ntBASIC23.19■■□□□ 1.3
SHC4Q6S5L8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHC4Q6S5L8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
SHC4Q6S5L8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 AC092720.2-201ENST00000602388 1665 ntBASIC23.17■■□□□ 1.3
SHC4Q6S5L8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHC4Q6S5L8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 UBE2DNL-204ENST00000602536 740 ntBASIC23.16■■□□□ 1.3
SHC4Q6S5L8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.16■■□□□ 1.3
SHC4Q6S5L8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 KRT19P1-201ENST00000405746 1186 ntBASIC23.15■■□□□ 1.3
SHC4Q6S5L8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 AFG3L1P-217ENST00000557444 2447 ntBASIC23.15■■□□□ 1.3
SHC4Q6S5L8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.15■■□□□ 1.3
SHC4Q6S5L8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SHC4Q6S5L8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHC4Q6S5L8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
SHC4Q6S5L8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.14■■□□□ 1.3
SHC4Q6S5L8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHC4Q6S5L8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHC4Q6S5L8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHC4Q6S5L8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms