Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.87■□□□□ 0.93
CASC4Q6P4E1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 AC245052.3-201ENST00000450182 901 ntBASIC20.86■□□□□ 0.93
CASC4Q6P4E1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 AC104187.1-201ENST00000607510 612 ntBASIC20.86■□□□□ 0.93
CASC4Q6P4E1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 KRT16P2-201ENST00000414673 1423 ntBASIC20.86■□□□□ 0.93
CASC4Q6P4E1 AC138932.1-201ENST00000534164 6830 ntBASIC20.86■□□□□ 0.93
CASC4Q6P4E1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CASC4Q6P4E1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 AC010141.2-201ENST00000452426 721 ntBASIC20.85■□□□□ 0.93
CASC4Q6P4E1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.85■□□□□ 0.93
CASC4Q6P4E1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 AC020907.5-201ENST00000624372 1936 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L2-201ENST00000561772 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L6-201ENST00000626483 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L1-201ENST00000627662 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L8-201ENST00000629013 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L3-201ENST00000630187 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L7-201ENST00000630678 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 DUX4L5-201ENST00000630834 1275 ntBASIC20.84■□□□□ 0.93
CASC4Q6P4E1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASC4Q6P4E1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CASC4Q6P4E1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.83■□□□□ 0.92
CASC4Q6P4E1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CASC4Q6P4E1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 AC123595.1-201ENST00000440769 1046 ntBASIC20.82■□□□□ 0.92
CASC4Q6P4E1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms