Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 AC007322.3-201ENST00000426526 701 ntBASIC21.33■■□□□ 1.01
LRRC38Q5VT99 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRC38Q5VT99 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
LRRC38Q5VT99 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.33■■□□□ 1
LRRC38Q5VT99 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LRRC38Q5VT99 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
LRRC38Q5VT99 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRRC38Q5VT99 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
LRRC38Q5VT99 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LRRC38Q5VT99 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.32■■□□□ 1
LRRC38Q5VT99 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.32■■□□□ 1
LRRC38Q5VT99 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
LRRC38Q5VT99 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.32■■□□□ 1
LRRC38Q5VT99 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.32■■□□□ 1
LRRC38Q5VT99 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.32■■□□□ 1
LRRC38Q5VT99 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.32■■□□□ 1
LRRC38Q5VT99 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.32■■□□□ 1
LRRC38Q5VT99 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LRRC38Q5VT99 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.32■■□□□ 1
LRRC38Q5VT99 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.32■■□□□ 1
LRRC38Q5VT99 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
LRRC38Q5VT99 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.32■■□□□ 1
LRRC38Q5VT99 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC38Q5VT99 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LRRC38Q5VT99 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 UBE2DNL-204ENST00000602536 740 ntBASIC21.31■■□□□ 1
LRRC38Q5VT99 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRRC38Q5VT99 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRRC38Q5VT99 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.31■■□□□ 1
LRRC38Q5VT99 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.31■■□□□ 1
LRRC38Q5VT99 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LRRC38Q5VT99 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.3■■□□□ 1
LRRC38Q5VT99 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
LRRC38Q5VT99 AC097381.1-201ENST00000429019 1296 ntBASIC21.3■■□□□ 1
LRRC38Q5VT99 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.3■■□□□ 1
LRRC38Q5VT99 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.3■■□□□ 1
LRRC38Q5VT99 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRRC38Q5VT99 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
LRRC38Q5VT99 MYCNOS-205ENST00000641950 531 ntBASIC21.3■■□□□ 1
LRRC38Q5VT99 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC38Q5VT99 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC38Q5VT99 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.29■■□□□ 1
LRRC38Q5VT99 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC38Q5VT99 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC38Q5VT99 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.29■■□□□ 1
LRRC38Q5VT99 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.29■■□□□ 1
LRRC38Q5VT99 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRRC38Q5VT99 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.29■■□□□ 1
LRRC38Q5VT99 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC38Q5VT99 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LRRC38Q5VT99 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC38Q5VT99 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC38Q5VT99 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.29■■□□□ 1
LRRC38Q5VT99 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC38Q5VT99 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.28■■□□□ 1
LRRC38Q5VT99 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
LRRC38Q5VT99 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.28■■□□□ 1
LRRC38Q5VT99 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 AC034268.1-201ENST00000441047 882 ntBASIC21.28■■□□□ 1
LRRC38Q5VT99 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.28■■□□□ 1
LRRC38Q5VT99 CDV3P1-201ENST00000471403 739 ntBASIC21.28■■□□□ 1
LRRC38Q5VT99 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 NTF6G-201ENST00000591094 616 ntBASIC21.28■■□□□ 1
LRRC38Q5VT99 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
LRRC38Q5VT99 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.28■■□□□ 1
LRRC38Q5VT99 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms