Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 KRASP1-201ENST00000407852 552 ntBASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 CD177P1-201ENST00000606252 935 ntBASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 AC113410.3-201ENST00000623366 203 ntBASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS13DQ5THJ4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 FAM99A-202ENST00000538190 1989 ntBASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 AC120498.8-201ENST00000614275 531 ntBASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VPS13DQ5THJ4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 TERF1P1-201ENST00000311003 1181 ntBASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 AC006557.6-201ENST00000623071 864 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms