Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 AL050303.2-201ENST00000619798 666 ntBASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAP1Q5SW96 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LDLRAP1Q5SW96 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.39■□□□□ 0.86
LDLRAP1Q5SW96 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LDLRAP1Q5SW96 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 AC005229.4-201ENST00000610085 2198 ntBASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAP1Q5SW96 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 AL512625.2-201ENST00000417533 625 ntBASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 AF201337.1-201ENST00000520239 748 ntBASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 AL121832.2-201ENST00000610979 668 ntBASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
LDLRAP1Q5SW96 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 NCF1B-203ENST00000435988 1254 ntBASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 AC100791.3-201ENST00000617619 330 ntBASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LDLRAP1Q5SW96 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 AC105036.2-201ENST00000569468 176 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms