Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 AC244015.2-201ENST00000616358 1861 ntBASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 FBXW4P1-201ENST00000426721 2239 ntBASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.53■□□□□ 0.56
RNFT1Q5M7Z0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 AP006294.2-201ENST00000641667 209 ntBASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.52■□□□□ 0.56
RNFT1Q5M7Z0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RNFT1Q5M7Z0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNFT1Q5M7Z0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RNFT1Q5M7Z0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 AL359736.2-201ENST00000621992 437 ntBASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNFT1Q5M7Z0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNFT1Q5M7Z0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms