Protein–RNA interactions for Protein: Q5JSP0

FGD3, FYVE, RhoGEF and PH domain-containing protein 3, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3Q5JSP0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FGD3Q5JSP0 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
FGD3Q5JSP0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 AL136116.3-201ENST00000402907 1138 ntBASIC19.19■□□□□ 0.66
FGD3Q5JSP0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 AC126544.1-201ENST00000580842 1059 ntBASIC19.19■□□□□ 0.66
FGD3Q5JSP0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 AC098818.2-201ENST00000564925 2320 ntBASIC19.19■□□□□ 0.66
FGD3Q5JSP0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FGD3Q5JSP0 SMG8-203ENST00000578922 2178 ntBASIC19.19■□□□□ 0.66
FGD3Q5JSP0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 AC138932.1-201ENST00000534164 6830 ntBASIC19.18■□□□□ 0.66
FGD3Q5JSP0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FGD3Q5JSP0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD3Q5JSP0 AC009237.3-201ENST00000393279 1427 ntBASIC19.17■□□□□ 0.66
FGD3Q5JSP0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 AC133561.4-201ENST00000566112 224 ntBASIC19.16■□□□□ 0.66
FGD3Q5JSP0 AC233992.3-201ENST00000607491 485 ntBASIC19.16■□□□□ 0.66
FGD3Q5JSP0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD3Q5JSP0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 IGHV3-19-201ENST00000521488 291 ntBASIC19.15■□□□□ 0.66
FGD3Q5JSP0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FGD3Q5JSP0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms