Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.27■■□□□ 1.16
DCAF4L1Q3SXM0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 TSPY20P-201ENST00000450910 630 ntBASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 AC121338.2-201ENST00000622535 1744 ntBASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DCAF4L1Q3SXM0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 AC027702.1-201ENST00000563810 1770 ntBASIC22.25■■□□□ 1.15
DCAF4L1Q3SXM0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 HLA-B-256ENST00000639848 1089 ntBASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DCAF4L1Q3SXM0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 C2orf69P4-201ENST00000565394 541 ntBASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 AC060766.5-201ENST00000590539 871 ntBASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
DCAF4L1Q3SXM0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 FAM201B-201ENST00000458407 597 ntBASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms