Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 tK(UUU)OtK(UUU)O 73 nt3.15□□□□□ -1.91
CTK1Q03957 tK(UUU)PtK(UUU)P 73 nt3.15□□□□□ -1.91
CTK1Q03957 LSM8YJR022W 330 nt3.15□□□□□ -1.91
CTK1Q03957 YKL111CYKL111C 336 nt3.15□□□□□ -1.91
CTK1Q03957 MRP8YKL142W 660 nt3.15□□□□□ -1.91
CTK1Q03957 JIP3YLR331C 378 nt3.15□□□□□ -1.91
CTK1Q03957 GIS2YNL255C 462 nt3.15□□□□□ -1.91
CTK1Q03957 YPL238CYPL238C 390 nt3.15□□□□□ -1.91
CTK1Q03957 ROX1YPR065W 1107 nt3.15□□□□□ -1.91
CTK1Q03957 RRP5YMR229C 5190 nt3.15□□□□□ -1.91
CTK1Q03957 PKH1YDR490C 2301 nt3.15□□□□□ -1.91
CTK1Q03957 RPN2YIL075C 2838 nt3.15□□□□□ -1.91
CTK1Q03957 MNT3YIL014W 1893 nt3.14□□□□□ -1.91
CTK1Q03957 TSA2YDR453C 591 nt3.14□□□□□ -1.91
CTK1Q03957 YER076W-AYER076W-A 348 nt3.14□□□□□ -1.91
CTK1Q03957 YPR010C-AYPR010C-A 219 nt3.14□□□□□ -1.91
CTK1Q03957 ATP22YDR350C 2055 nt3.14□□□□□ -1.91
CTK1Q03957 YEL025CYEL025C 3567 nt3.13□□□□□ -1.91
CTK1Q03957 CWC22YGR278W 1734 nt3.13□□□□□ -1.91
CTK1Q03957 YAR029WYAR029W 225 nt3.13□□□□□ -1.91
CTK1Q03957 PRE8YML092C 753 nt3.13□□□□□ -1.91
CTK1Q03957 TIM12YBR091C 330 nt3.13□□□□□ -1.91
CTK1Q03957 SNX41YDR425W 1878 nt3.13□□□□□ -1.91
CTK1Q03957 STU2YLR045C 2667 nt3.13□□□□□ -1.91
CTK1Q03957 DNM1YLL001W 2274 nt3.12□□□□□ -1.91
CTK1Q03957 SEC15YGL233W 2733 nt3.12□□□□□ -1.91
CTK1Q03957 PSF1YDR013W 627 nt3.12□□□□□ -1.91
CTK1Q03957 BAT1YHR208W 1182 nt3.12□□□□□ -1.91
CTK1Q03957 ETP1YHL010C 1758 nt3.12□□□□□ -1.91
CTK1Q03957 BYE1YKL005C 1785 nt3.12□□□□□ -1.91
CTK1Q03957 MIT1YEL007W 2001 nt3.12□□□□□ -1.91
CTK1Q03957 YSW1YBR148W 1830 nt3.12□□□□□ -1.91
CTK1Q03957 SQS1YNL224C 2304 nt3.11□□□□□ -1.91
CTK1Q03957 HMRA2YCR096C 360 nt3.11□□□□□ -1.91
CTK1Q03957 snR8snR8 190 nt3.11□□□□□ -1.91
CTK1Q03957 YFL032WYFL032W 321 nt3.11□□□□□ -1.91
CTK1Q03957 snR191snR191 274 nt3.11□□□□□ -1.91
CTK1Q03957 FLO9YAL063C 3969 nt3.11□□□□□ -1.91
CTK1Q03957 GCN1YGL195W 8019 nt3.11□□□□□ -1.91
CTK1Q03957 BIT61YJL058C 1632 nt3.11□□□□□ -1.91
CTK1Q03957 OST1YJL002C 1431 nt3.1□□□□□ -1.91
CTK1Q03957 COX23YHR116W 456 nt3.1□□□□□ -1.91
CTK1Q03957 URM1YIL008W 300 nt3.1□□□□□ -1.91
CTK1Q03957 tW(UCA)QtW(UCA)Q 74 nt3.1□□□□□ -1.91
CTK1Q03957 TIM8YJR135W-A 264 nt3.1□□□□□ -1.91
CTK1Q03957 RPS21AYKR057W 264 nt3.1□□□□□ -1.91
CTK1Q03957 RPS22BYLR367W 393 nt3.1□□□□□ -1.91
CTK1Q03957 YOR073W-AYOR073W-A 234 nt3.1□□□□□ -1.91
CTK1Q03957 BIL1YOR304C-A 231 nt3.1□□□□□ -1.91
CTK1Q03957 EGD1YPL037C 474 nt3.1□□□□□ -1.91
CTK1Q03957 CCT7YJL111W 1653 nt3.1□□□□□ -1.91
CTK1Q03957 NDD1YOR372C 1665 nt3.1□□□□□ -1.91
CTK1Q03957 REC8YPR007C 2043 nt3.1□□□□□ -1.91
CTK1Q03957 CDH1YGL003C 1701 nt3.1□□□□□ -1.91
CTK1Q03957 NOP4YPL043W 2058 nt3.1□□□□□ -1.91
CTK1Q03957 STE14YDR410C 720 nt3.09□□□□□ -1.91
CTK1Q03957 YHL006W-AYHL006W-A 354 nt3.09□□□□□ -1.91
CTK1Q03957 YJL202CYJL202C 348 nt3.09□□□□□ -1.91
CTK1Q03957 SSN8YNL025C 972 nt3.09□□□□□ -1.91
CTK1Q03957 NMA111YNL123W 2994 nt3.09□□□□□ -1.91
CTK1Q03957 REG1YDR028C 3045 nt3.09□□□□□ -1.92
CTK1Q03957 YEL057CYEL057C 702 nt3.08□□□□□ -1.92
CTK1Q03957 AAD16YFL057C 459 nt3.08□□□□□ -1.92
CTK1Q03957 RPS23AYGR118W 438 nt3.08□□□□□ -1.92
CTK1Q03957 tT(UGU)Q1tT(UGU)Q1 76 nt3.08□□□□□ -1.92
CTK1Q03957 PAU14YIL176C 363 nt3.08□□□□□ -1.92
CTK1Q03957 MSL1YIR009W 336 nt3.08□□□□□ -1.92
CTK1Q03957 PAU1YJL223C 363 nt3.08□□□□□ -1.92
CTK1Q03957 YMR290W-AYMR290W-A 348 nt3.08□□□□□ -1.92
CTK1Q03957 YPR077CYPR077C 372 nt3.08□□□□□ -1.92
CTK1Q03957 TFB1YDR311W 1929 nt3.08□□□□□ -1.92
CTK1Q03957 PDC2YDR081C 2778 nt3.08□□□□□ -1.92
CTK1Q03957 tF(GAA)DtF(GAA)D 73 nt3.07□□□□□ -1.92
CTK1Q03957 tF(GAA)NtF(GAA)N 73 nt3.07□□□□□ -1.92
CTK1Q03957 SHE2YKL130C 741 nt3.07□□□□□ -1.92
CTK1Q03957 snR42snR42 351 nt3.07□□□□□ -1.92
CTK1Q03957 MSH2YOL090W 2895 nt3.07□□□□□ -1.92
CTK1Q03957 STE5YDR103W 2754 nt3.06□□□□□ -1.92
CTK1Q03957 CAJ1YER048C 1176 nt3.06□□□□□ -1.92
CTK1Q03957 YFR056CYFR056C 369 nt3.06□□□□□ -1.92
CTK1Q03957 HOP2YGL033W 657 nt3.06□□□□□ -1.92
CTK1Q03957 MCM22YJR135C 720 nt3.06□□□□□ -1.92
CTK1Q03957 snR36snR36 182 nt3.06□□□□□ -1.92
CTK1Q03957 YSP2YDR326C 4317 nt3.06□□□□□ -1.92
CTK1Q03957 VPS3YDR495C 3036 nt3.06□□□□□ -1.92
CTK1Q03957 YNL034WYNL034W 1839 nt3.05□□□□□ -1.92
CTK1Q03957 YHR078WYHR078W 1659 nt3.05□□□□□ -1.92
CTK1Q03957 YER039C-AYER039C-A 219 nt3.05□□□□□ -1.92
CTK1Q03957 USE1YGL098W 738 nt3.05□□□□□ -1.92
CTK1Q03957 RPL39YJL189W 156 nt3.05□□□□□ -1.92
CTK1Q03957 AIM32YML050W 936 nt3.05□□□□□ -1.92
CTK1Q03957 YMR317WYMR317W 3423 nt3.05□□□□□ -1.92
CTK1Q03957 COX1Q0045 1605 nt3.04□□□□□ -1.92
CTK1Q03957 YAL064W-BYAL064W-B 381 nt3.04□□□□□ -1.92
CTK1Q03957 SWD3YBR175W 948 nt3.04□□□□□ -1.92
CTK1Q03957 SIZ1YDR409W 2715 nt3.04□□□□□ -1.92
CTK1Q03957 IOC3YFR013W 2364 nt3.03□□□□□ -1.92
CTK1Q03957 VTC4YJL012C 2166 nt3.03□□□□□ -1.92
CTK1Q03957 YER023C-AYER023C-A 213 nt3.03□□□□□ -1.92
CTK1Q03957 RPL30YGL030W 318 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms