Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPXP78539 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SRPXP78539 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPXP78539 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SRPXP78539 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPXP78539 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 TCF3P1-201ENST00000423021 1937 ntBASIC16.88■□□□□ 0.29
SRPXP78539 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SRPXP78539 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPXP78539 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.87■□□□□ 0.29
SRPXP78539 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SRPXP78539 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SRPXP78539 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.87■□□□□ 0.29
SRPXP78539 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SRPXP78539 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SRPXP78539 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.87■□□□□ 0.29
SRPXP78539 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SRPXP78539 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.87■□□□□ 0.29
SRPXP78539 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRPXP78539 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.86■□□□□ 0.29
SRPXP78539 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SRPXP78539 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 AC018445.3-201ENST00000624177 1945 ntBASIC16.86■□□□□ 0.29
SRPXP78539 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SRPXP78539 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 SERBP1P1-201ENST00000396021 1160 ntBASIC16.86■□□□□ 0.29
SRPXP78539 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SRPXP78539 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
SRPXP78539 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.86■□□□□ 0.29
SRPXP78539 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRPXP78539 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
SRPXP78539 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.85■□□□□ 0.29
SRPXP78539 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.85■□□□□ 0.29
SRPXP78539 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.85■□□□□ 0.29
SRPXP78539 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.85■□□□□ 0.29
SRPXP78539 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRPXP78539 AC055733.4-201ENST00000638462 1354 ntBASIC16.85■□□□□ 0.29
SRPXP78539 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRPXP78539 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.85■□□□□ 0.29
SRPXP78539 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.85■□□□□ 0.29
SRPXP78539 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRPXP78539 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRPXP78539 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRPXP78539 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SRPXP78539 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRPXP78539 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SRPXP78539 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRPXP78539 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRPXP78539 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.84■□□□□ 0.29
SRPXP78539 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRPXP78539 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.84■□□□□ 0.29
SRPXP78539 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.84■□□□□ 0.29
SRPXP78539 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms