Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AL121603.2-201ENST00000557373 2117 ntBASIC20.63■□□□□ 0.89
PRAMEP78395 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEP78395 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRAMEP78395 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEP78395 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRAMEP78395 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEP78395 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEP78395 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEP78395 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.63■□□□□ 0.89
PRAMEP78395 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEP78395 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.63■□□□□ 0.89
PRAMEP78395 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.63■□□□□ 0.89
PRAMEP78395 AC243732.1-201ENST00000612648 864 ntBASIC20.63■□□□□ 0.89
PRAMEP78395 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRAMEP78395 AC116050.2-201ENST00000612102 1779 ntBASIC20.63■□□□□ 0.89
PRAMEP78395 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEP78395 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEP78395 FEM1AP1-201ENST00000431297 1995 ntBASIC20.63■□□□□ 0.89
PRAMEP78395 FP700111.2-201ENST00000619190 1892 ntBASIC20.62■□□□□ 0.89
PRAMEP78395 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 RBM17P2-201ENST00000616397 1405 ntBASIC20.62■□□□□ 0.89
PRAMEP78395 AC007225.1-201ENST00000566331 1836 ntBASIC20.62■□□□□ 0.89
PRAMEP78395 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRAMEP78395 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEP78395 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PRAMEP78395 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEP78395 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PRAMEP78395 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
PRAMEP78395 AC026271.2-201ENST00000428091 497 ntBASIC20.62■□□□□ 0.89
PRAMEP78395 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEP78395 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEP78395 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEP78395 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.62■□□□□ 0.89
PRAMEP78395 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEP78395 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.62■□□□□ 0.89
PRAMEP78395 MYCNOS-205ENST00000641950 531 ntBASIC20.62■□□□□ 0.89
PRAMEP78395 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEP78395 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEP78395 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEP78395 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEP78395 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEP78395 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.61■□□□□ 0.89
PRAMEP78395 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEP78395 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PRAMEP78395 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.61■□□□□ 0.89
PRAMEP78395 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEP78395 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRAMEP78395 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRAMEP78395 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PRAMEP78395 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEP78395 KRT18P5-201ENST00000436075 1291 ntBASIC20.6■□□□□ 0.89
PRAMEP78395 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.6■□□□□ 0.89
PRAMEP78395 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEP78395 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.6■□□□□ 0.89
PRAMEP78395 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.6■□□□□ 0.89
PRAMEP78395 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEP78395 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEP78395 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRAMEP78395 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.59■□□□□ 0.89
PRAMEP78395 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.59■□□□□ 0.89
PRAMEP78395 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PRAMEP78395 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEP78395 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEP78395 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms