Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.47□□□□□ -0.09
RPL39P62891 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.47□□□□□ -0.09
RPL39P62891 SLC47A1P1-202ENST00000449666 945 ntBASIC14.47□□□□□ -0.09
RPL39P62891 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.47□□□□□ -0.09
RPL39P62891 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.47□□□□□ -0.09
RPL39P62891 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.47□□□□□ -0.09
RPL39P62891 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.47□□□□□ -0.09
RPL39P62891 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
RPL39P62891 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RPL39P62891 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.47□□□□□ -0.09
RPL39P62891 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RPL39P62891 TCF3P1-201ENST00000423021 1937 ntBASIC14.47□□□□□ -0.09
RPL39P62891 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RPL39P62891 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL39P62891 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL39P62891 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPL39P62891 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL39P62891 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL39P62891 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RPL39P62891 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.46□□□□□ -0.09
RPL39P62891 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.46□□□□□ -0.09
RPL39P62891 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RPL39P62891 AC018445.3-201ENST00000624177 1945 ntBASIC14.46□□□□□ -0.09
RPL39P62891 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.46□□□□□ -0.09
RPL39P62891 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPL39P62891 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL39P62891 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RPL39P62891 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPL39P62891 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.46□□□□□ -0.1
RPL39P62891 AC098818.2-201ENST00000564925 2320 ntBASIC14.46□□□□□ -0.1
RPL39P62891 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RPL39P62891 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RPL39P62891 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.45□□□□□ -0.1
RPL39P62891 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL39P62891 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.45□□□□□ -0.1
RPL39P62891 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 BX005040.4-201ENST00000637145 1518 ntBASIC14.45□□□□□ -0.1
RPL39P62891 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.45□□□□□ -0.1
RPL39P62891 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RPL39P62891 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPL39P62891 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.44□□□□□ -0.1
RPL39P62891 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RPL39P62891 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL39P62891 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms