Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC093787.1-201ENST00000450396 207 ntBASIC18.9■□□□□ 0.62
PER3P56645 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.9■□□□□ 0.62
PER3P56645 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.9■□□□□ 0.62
PER3P56645 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 AC053503.5-201ENST00000601508 636 ntBASIC18.9■□□□□ 0.62
PER3P56645 AC083880.1-201ENST00000608266 535 ntBASIC18.9■□□□□ 0.62
PER3P56645 AC008175.2-201ENST00000612840 297 ntBASIC18.9■□□□□ 0.62
PER3P56645 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.9■□□□□ 0.62
PER3P56645 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PER3P56645 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PER3P56645 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.89■□□□□ 0.62
PER3P56645 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PER3P56645 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PER3P56645 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PER3P56645 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.89■□□□□ 0.61
PER3P56645 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.89■□□□□ 0.61
PER3P56645 UNC93B4-201ENST00000505679 747 ntBASIC18.89■□□□□ 0.61
PER3P56645 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.89■□□□□ 0.61
PER3P56645 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.89■□□□□ 0.61
PER3P56645 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PER3P56645 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PER3P56645 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
PER3P56645 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PER3P56645 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
PER3P56645 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.88■□□□□ 0.61
PER3P56645 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.88■□□□□ 0.61
PER3P56645 AC128676.1-201ENST00000454392 318 ntBASIC18.88■□□□□ 0.61
PER3P56645 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.88■□□□□ 0.61
PER3P56645 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.88■□□□□ 0.61
PER3P56645 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.88■□□□□ 0.61
PER3P56645 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.88■□□□□ 0.61
PER3P56645 MYC-209ENST00000641252 345 ntBASIC18.88■□□□□ 0.61
PER3P56645 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PER3P56645 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
PER3P56645 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PER3P56645 C11orf96-202ENST00000528572 1834 ntBASIC18.88■□□□□ 0.61
PER3P56645 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PER3P56645 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PER3P56645 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PER3P56645 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.87■□□□□ 0.61
PER3P56645 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.87■□□□□ 0.61
PER3P56645 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 EEF1DP3-203ENST00000566025 782 ntBASIC18.87■□□□□ 0.61
PER3P56645 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.87■□□□□ 0.61
PER3P56645 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.87■□□□□ 0.61
PER3P56645 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PER3P56645 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PER3P56645 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.87■□□□□ 0.61
PER3P56645 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PER3P56645 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms