Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 DAD4YDR320C-A 219 nt2.06□□□□□ -2.08
YNL040WP53960 GPI19YDR437W 423 nt2.06□□□□□ -2.08
YNL040WP53960 GLC7YER133W 939 nt2.06□□□□□ -2.08
YNL040WP53960 SDS22YKL193C 1017 nt2.06□□□□□ -2.08
YNL040WP53960 RPL36AYMR194W 303 nt2.06□□□□□ -2.08
YNL040WP53960 15S_rRNA15S_rRNA 1649 nt2.06□□□□□ -2.08
YNL040WP53960 SNU114YKL173W 3027 nt2.05□□□□□ -2.08
YNL040WP53960 YDL158CYDL158C 309 nt2.05□□□□□ -2.08
YNL040WP53960 RPS17BYDR447C 411 nt2.05□□□□□ -2.08
YNL040WP53960 YER172C-AYER172C-A 381 nt2.05□□□□□ -2.08
YNL040WP53960 VPS63YLR261C 327 nt2.05□□□□□ -2.08
YNL040WP53960 SFM1YOR021C 642 nt2.05□□□□□ -2.08
YNL040WP53960 SRL4YPL033C 846 nt2.05□□□□□ -2.08
YNL040WP53960 UBP16YPL072W 1500 nt2.05□□□□□ -2.08
YNL040WP53960 DAL5YJR152W 1632 nt2.05□□□□□ -2.08
YNL040WP53960 SCY1YGL083W 2415 nt2.05□□□□□ -2.08
YNL040WP53960 KSP1YHR082C 3090 nt2.04□□□□□ -2.08
YNL040WP53960 REF2YDR195W 1602 nt2.04□□□□□ -2.08
YNL040WP53960 YER119C-AYER119C-A 372 nt2.04□□□□□ -2.08
YNL040WP53960 YFR009W-AYFR009W-A 258 nt2.04□□□□□ -2.08
YNL040WP53960 MND1YGL183C 660 nt2.04□□□□□ -2.08
YNL040WP53960 RRF1YHR038W 693 nt2.04□□□□□ -2.08
YNL040WP53960 YLR255CYLR255C 354 nt2.04□□□□□ -2.08
YNL040WP53960 COX8YLR395C 237 nt2.04□□□□□ -2.08
YNL040WP53960 CTF13YMR094W 1437 nt2.04□□□□□ -2.08
YNL040WP53960 YNL046WYNL046W 519 nt2.04□□□□□ -2.08
YNL040WP53960 YNL235CYNL235C 432 nt2.04□□□□□ -2.08
YNL040WP53960 KAR9YPL269W 1935 nt2.04□□□□□ -2.08
YNL040WP53960 AGC1YPR021C 2709 nt2.04□□□□□ -2.08
YNL040WP53960 YPR089WYPR089W 2667 nt2.04□□□□□ -2.08
YNL040WP53960 YPR145C-AYPR145C-A 237 nt2.04□□□□□ -2.08
YNL040WP53960 APM3YBR288C 1452 nt2.03□□□□□ -2.08
YNL040WP53960 FKS1YLR342W 5631 nt2.03□□□□□ -2.08
YNL040WP53960 GDI1YER136W 1356 nt2.03□□□□□ -2.08
YNL040WP53960 snR5snR5 204 nt2.03□□□□□ -2.08
YNL040WP53960 YDL163WYDL163W 303 nt2.03□□□□□ -2.08
YNL040WP53960 TWF1YGR080W 999 nt2.03□□□□□ -2.08
YNL040WP53960 YBL012CYBL012C 402 nt2.03□□□□□ -2.08
YNL040WP53960 YOL085W-AYOL085W-A 213 nt2.03□□□□□ -2.08
YNL040WP53960 YRR1YOR162C 2433 nt2.03□□□□□ -2.08
YNL040WP53960 SET2YJL168C 2202 nt2.03□□□□□ -2.08
YNL040WP53960 NUP100YKL068W 2880 nt2.03□□□□□ -2.08
YNL040WP53960 INP51YIL002C 2841 nt2.03□□□□□ -2.09
YNL040WP53960 YJL070CYJL070C 2667 nt2.03□□□□□ -2.09
YNL040WP53960 YRB1YDR002W 606 nt2.02□□□□□ -2.09
YNL040WP53960 YDR115WYDR115W 318 nt2.02□□□□□ -2.09
YNL040WP53960 RPS26BYER131W 360 nt2.02□□□□□ -2.09
YNL040WP53960 PET191YJR034W 327 nt2.02□□□□□ -2.09
YNL040WP53960 LCL2YLR104W 396 nt2.02□□□□□ -2.09
YNL040WP53960 YMR320WYMR320W 306 nt2.02□□□□□ -2.09
YNL040WP53960 VID24YBR105C 1089 nt2.02□□□□□ -2.09
YNL040WP53960 YCL007CYCL007C 393 nt2.02□□□□□ -2.09
YNL040WP53960 NCS2YNL119W 1482 nt2.01□□□□□ -2.09
YNL040WP53960 RGL1YPL066W 1440 nt2.01□□□□□ -2.09
YNL040WP53960 LEU3YLR451W 2661 nt2.01□□□□□ -2.09
YNL040WP53960 SNO3YFL060C 669 nt2.01□□□□□ -2.09
YNL040WP53960 PRP38YGR075C 729 nt2.01□□□□□ -2.09
YNL040WP53960 YMR173W-AYMR173W-A 1185 nt2.01□□□□□ -2.09
YNL040WP53960 SNO2YNL334C 669 nt2.01□□□□□ -2.09
YNL040WP53960 YOR152CYOR152C 771 nt2.01□□□□□ -2.09
YNL040WP53960 ARL3YPL051W 597 nt2.01□□□□□ -2.09
YNL040WP53960 ELG1YOR144C 2376 nt2□□□□□ -2.09
YNL040WP53960 YFL002W-BYFL002W-B 1317 nt2□□□□□ -2.09
YNL040WP53960 YGR161W-AYGR161W-A 1317 nt2□□□□□ -2.09
YNL040WP53960 YBL100W-AYBL100W-A 1317 nt2□□□□□ -2.09
YNL040WP53960 YCL020WYCL020W 1317 nt2□□□□□ -2.09
YNL040WP53960 YEL043WYEL043W 2871 nt2□□□□□ -2.09
YNL040WP53960 DAD1YDR016C 285 nt2□□□□□ -2.09
YNL040WP53960 SDC1YDR469W 528 nt2□□□□□ -2.09
YNL040WP53960 TIM9YEL020W-A 264 nt2□□□□□ -2.09
YNL040WP53960 TDA2YER071C 381 nt2□□□□□ -2.09
YNL040WP53960 YHR071C-AYHR071C-A 321 nt2□□□□□ -2.09
YNL040WP53960 AIM18YHR198C 966 nt2□□□□□ -2.09
YNL040WP53960 YKL123WYKL123W 381 nt2□□□□□ -2.09
YNL040WP53960 MIX23YBL107C 591 nt2□□□□□ -2.09
YNL040WP53960 YPR170CYPR170C 336 nt2□□□□□ -2.09
YNL040WP53960 YBR197CYBR197C 654 nt2□□□□□ -2.09
YNL040WP53960 PRP6YBR055C 2700 nt2□□□□□ -2.09
YNL040WP53960 YDR179W-AYDR179W-A 1392 nt1.99□□□□□ -2.09
YNL040WP53960 PES4YFR023W 1836 nt1.99□□□□□ -2.09
YNL040WP53960 YGR109W-AYGR109W-A 873 nt1.99□□□□□ -2.09
YNL040WP53960 YGR226CYGR226C 210 nt1.99□□□□□ -2.09
YNL040WP53960 YIL082WYIL082W 873 nt1.99□□□□□ -2.09
YNL040WP53960 YJL086CYJL086C 369 nt1.99□□□□□ -2.09
YNL040WP53960 YJL119CYJL119C 324 nt1.99□□□□□ -2.09
YNL040WP53960 PDP3YLR455W 915 nt1.99□□□□□ -2.09
YNL040WP53960 YMR254CYMR254C 309 nt1.99□□□□□ -2.09
YNL040WP53960 MUD1YBR119W 897 nt1.99□□□□□ -2.09
YNL040WP53960 VPS16YPL045W 2397 nt1.99□□□□□ -2.09
YNL040WP53960 GAL80YML051W 1308 nt1.98□□□□□ -2.09
YNL040WP53960 YFH1YDL120W 525 nt1.98□□□□□ -2.09
YNL040WP53960 YDR042CYDR042C 603 nt1.98□□□□□ -2.09
YNL040WP53960 ACB1YGR037C 264 nt1.98□□□□□ -2.09
YNL040WP53960 COG2YGR120C 789 nt1.98□□□□□ -2.09
YNL040WP53960 SRP21YKL122C 504 nt1.98□□□□□ -2.09
YNL040WP53960 ECM9YKR004C 1134 nt1.98□□□□□ -2.09
YNL040WP53960 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
YNL040WP53960 YOR169CYOR169C 465 nt1.98□□□□□ -2.09
YNL040WP53960 snR59snR59 78 nt1.97□□□□□ -2.09
YNL040WP53960 NCB2YDR397C 441 nt1.97□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms