Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 SSE1YPL106C 2082 nt3.92□□□□□ -1.78
CUZ1P53899 TEL1YBL088C 8364 nt3.92□□□□□ -1.78
CUZ1P53899 YDR426CYDR426C 378 nt3.92□□□□□ -1.78
CUZ1P53899 NKP2YLR315W 462 nt3.92□□□□□ -1.78
CUZ1P53899 CCW14YLR390W-A 717 nt3.92□□□□□ -1.78
CUZ1P53899 CSE2YNR010W 450 nt3.92□□□□□ -1.78
CUZ1P53899 TRM44YPL030W 1704 nt3.92□□□□□ -1.78
CUZ1P53899 GPR1YDL035C 2886 nt3.92□□□□□ -1.78
CUZ1P53899 NRP1YDL167C 2160 nt3.92□□□□□ -1.78
CUZ1P53899 YGR250CYGR250C 2346 nt3.92□□□□□ -1.78
CUZ1P53899 TOF2YKR010C 2316 nt3.92□□□□□ -1.78
CUZ1P53899 YHR210CYHR210C 1026 nt3.91□□□□□ -1.78
CUZ1P53899 YOR015WYOR015W 360 nt3.91□□□□□ -1.78
CUZ1P53899 HHF1YBR009C 312 nt3.91□□□□□ -1.78
CUZ1P53899 YOR376WYOR376W 369 nt3.91□□□□□ -1.78
CUZ1P53899 ISU1YPL135W 498 nt3.91□□□□□ -1.78
CUZ1P53899 TRM2YKR056W 1920 nt3.91□□□□□ -1.78
CUZ1P53899 CHL1YPL008W 2586 nt3.91□□□□□ -1.78
CUZ1P53899 YTA6YPL074W 2265 nt3.91□□□□□ -1.78
CUZ1P53899 TSA2YDR453C 591 nt3.9□□□□□ -1.79
CUZ1P53899 PFK26YIL107C 2484 nt3.9□□□□□ -1.79
CUZ1P53899 SSY1YDR160W 2559 nt3.9□□□□□ -1.79
CUZ1P53899 GAL4YPL248C 2646 nt3.9□□□□□ -1.79
CUZ1P53899 SFI1YLL003W 2841 nt3.89□□□□□ -1.79
CUZ1P53899 FOX2YKR009C 2703 nt3.89□□□□□ -1.79
CUZ1P53899 GCR1YPL075W 2358 nt3.89□□□□□ -1.79
CUZ1P53899 KAP114YGL241W 3015 nt3.89□□□□□ -1.79
CUZ1P53899 FMP46YKR049C 402 nt3.89□□□□□ -1.79
CUZ1P53899 SRL3YKR091W 741 nt3.89□□□□□ -1.79
CUZ1P53899 PDS5YMR076C 3834 nt3.89□□□□□ -1.79
CUZ1P53899 JHD2YJR119C 2187 nt3.89□□□□□ -1.79
CUZ1P53899 LCB5YLR260W 2064 nt3.88□□□□□ -1.79
CUZ1P53899 PRM15YMR278W 1869 nt3.88□□□□□ -1.79
CUZ1P53899 GDH2YDL215C 3279 nt3.88□□□□□ -1.79
CUZ1P53899 MRPL33YMR286W 261 nt3.88□□□□□ -1.79
CUZ1P53899 SAR1YPL218W 573 nt3.88□□□□□ -1.79
CUZ1P53899 MET4YNL103W 2019 nt3.88□□□□□ -1.79
CUZ1P53899 FRT2YAL028W 1587 nt3.88□□□□□ -1.79
CUZ1P53899 BBC1YJL020C 3474 nt3.87□□□□□ -1.79
CUZ1P53899 CWC22YGR278W 1734 nt3.87□□□□□ -1.79
CUZ1P53899 MNN4YKL201C 3537 nt3.87□□□□□ -1.79
CUZ1P53899 YLR012CYLR012C 300 nt3.87□□□□□ -1.79
CUZ1P53899 APC9YLR102C 798 nt3.87□□□□□ -1.79
CUZ1P53899 RPS18BYML026C 441 nt3.87□□□□□ -1.79
CUZ1P53899 YML037CYML037C 1023 nt3.87□□□□□ -1.79
CUZ1P53899 YBR182C-AYBR182C-A 195 nt3.87□□□□□ -1.79
CUZ1P53899 YSH1YLR277C 2340 nt3.87□□□□□ -1.79
CUZ1P53899 SLP1YOR154W 1764 nt3.86□□□□□ -1.79
CUZ1P53899 snR72snR72 98 nt3.86□□□□□ -1.79
CUZ1P53899 NPC2YDL046W 522 nt3.86□□□□□ -1.79
CUZ1P53899 FLO8YER109C 2400 nt3.86□□□□□ -1.79
CUZ1P53899 FRE8YLR047C 2061 nt3.86□□□□□ -1.79
CUZ1P53899 SNF2YOR290C 5112 nt3.86□□□□□ -1.79
CUZ1P53899 CDC45YLR103C 1953 nt3.85□□□□□ -1.79
CUZ1P53899 JJJ2YJL162C 1752 nt3.85□□□□□ -1.79
CUZ1P53899 YDL041WYDL041W 354 nt3.85□□□□□ -1.79
CUZ1P53899 YHL005CYHL005C 393 nt3.85□□□□□ -1.79
CUZ1P53899 NCE101YJL205C 162 nt3.85□□□□□ -1.79
CUZ1P53899 YPR002C-AYPR002C-A 198 nt3.85□□□□□ -1.79
CUZ1P53899 YDR261C-DYDR261C-D 4815 nt3.85□□□□□ -1.79
CUZ1P53899 GYP7YDL234C 2241 nt3.85□□□□□ -1.79
CUZ1P53899 EGT2YNL327W 3126 nt3.84□□□□□ -1.79
CUZ1P53899 SEG2YKL105C 3399 nt3.84□□□□□ -1.79
CUZ1P53899 GRC3YLL035W 1899 nt3.84□□□□□ -1.79
CUZ1P53899 HDA3YPR179C 1968 nt3.84□□□□□ -1.79
CUZ1P53899 YJL222W-BYJL222W-B 138 nt3.84□□□□□ -1.79
CUZ1P53899 YIL166CYIL166C 1629 nt3.84□□□□□ -1.8
CUZ1P53899 ECM16YMR128W 3804 nt3.84□□□□□ -1.8
CUZ1P53899 ADP1YCR011C 3150 nt3.84□□□□□ -1.8
CUZ1P53899 SWA2YDR320C 2007 nt3.83□□□□□ -1.8
CUZ1P53899 SEC5YDR166C 2916 nt3.83□□□□□ -1.8
CUZ1P53899 tL(UAG)JtL(UAG)J 82 nt3.83□□□□□ -1.8
CUZ1P53899 tL(UAG)L1tL(UAG)L1 82 nt3.83□□□□□ -1.8
CUZ1P53899 tL(UAG)L2tL(UAG)L2 82 nt3.83□□□□□ -1.8
CUZ1P53899 LDS2YOL047C 1071 nt3.83□□□□□ -1.8
CUZ1P53899 YBR131C-AYBR131C-A 90 nt3.83□□□□□ -1.8
CUZ1P53899 ALO1YML086C 1581 nt3.83□□□□□ -1.8
CUZ1P53899 YBR184WYBR184W 1572 nt3.83□□□□□ -1.8
CUZ1P53899 PDC2YDR081C 2778 nt3.82□□□□□ -1.8
CUZ1P53899 SBE2YDR351W 2595 nt3.82□□□□□ -1.8
CUZ1P53899 RAD16YBR114W 2373 nt3.82□□□□□ -1.8
CUZ1P53899 PDE2YOR360C 1581 nt3.82□□□□□ -1.8
CUZ1P53899 RPS18AYDR450W 441 nt3.82□□□□□ -1.8
CUZ1P53899 YGL239CYGL239C 315 nt3.82□□□□□ -1.8
CUZ1P53899 DLS1YJL065C 504 nt3.82□□□□□ -1.8
CUZ1P53899 GOT1YMR292W 417 nt3.82□□□□□ -1.8
CUZ1P53899 YGR125WYGR125W 3111 nt3.82□□□□□ -1.8
CUZ1P53899 SEA4YBL104C 3117 nt3.81□□□□□ -1.8
CUZ1P53899 UPC2YDR213W 2742 nt3.81□□□□□ -1.8
CUZ1P53899 OLE1YGL055W 1533 nt3.81□□□□□ -1.8
CUZ1P53899 SPI1YER150W 447 nt3.81□□□□□ -1.8
CUZ1P53899 YCL001W-BYCL001W-B 255 nt3.81□□□□□ -1.8
CUZ1P53899 BRE4YDL231C 3378 nt3.81□□□□□ -1.8
CUZ1P53899 HFA1YMR207C 6372 nt3.81□□□□□ -1.8
CUZ1P53899 ABF1YKL112W 2196 nt3.8□□□□□ -1.8
CUZ1P53899 CDC24YAL041W 2565 nt3.8□□□□□ -1.8
CUZ1P53899 KIN2YLR096W 3444 nt3.8□□□□□ -1.8
CUZ1P53899 YGL074CYGL074C 327 nt3.8□□□□□ -1.8
CUZ1P53899 RPL23AYBL087C 414 nt3.8□□□□□ -1.8
CUZ1P53899 LCD1YDR499W 2244 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 58.5 ms