Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC6A12P48065 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SLC6A12P48065 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC6A12P48065 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SLC6A12P48065 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC6A12P48065 DUX4L16-201ENST00000555130 1264 ntBASIC19.84■□□□□ 0.77
SLC6A12P48065 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC6A12P48065 AL162412.1-201ENST00000567129 965 ntBASIC19.84■□□□□ 0.77
SLC6A12P48065 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC6A12P48065 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.84■□□□□ 0.77
SLC6A12P48065 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.84■□□□□ 0.77
SLC6A12P48065 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 FAM21FP-204ENST00000608637 956 ntBASIC19.84■□□□□ 0.77
SLC6A12P48065 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SLC6A12P48065 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC6A12P48065 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A12P48065 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC6A12P48065 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.83■□□□□ 0.77
SLC6A12P48065 CNN2P6-201ENST00000439038 900 ntBASIC19.83■□□□□ 0.77
SLC6A12P48065 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC6A12P48065 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC6A12P48065 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC6A12P48065 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A12P48065 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC6A12P48065 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.83■□□□□ 0.76
SLC6A12P48065 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SLC6A12P48065 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SLC6A12P48065 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 AC073130.3-201ENST00000624389 2278 ntBASIC19.82■□□□□ 0.76
SLC6A12P48065 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLC6A12P48065 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.82■□□□□ 0.76
SLC6A12P48065 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A12P48065 AC011767.1-201ENST00000617410 1153 ntBASIC19.82■□□□□ 0.76
SLC6A12P48065 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC6A12P48065 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC6A12P48065 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A12P48065 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SLC6A12P48065 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A12P48065 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.81■□□□□ 0.76
SLC6A12P48065 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A12P48065 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SLC6A12P48065 AC022517.1-201ENST00000592429 346 ntBASIC19.81■□□□□ 0.76
SLC6A12P48065 AC016405.3-201ENST00000607710 860 ntBASIC19.81■□□□□ 0.76
SLC6A12P48065 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC6A12P48065 KRT8P36-201ENST00000489121 1440 ntBASIC19.81■□□□□ 0.76
SLC6A12P48065 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SLC6A12P48065 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC6A12P48065 PKD1P6-201ENST00000343738 4769 ntBASIC19.81■□□□□ 0.76
SLC6A12P48065 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A12P48065 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A12P48065 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC6A12P48065 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A12P48065 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A12P48065 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SLC6A12P48065 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A12P48065 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SLC6A12P48065 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SLC6A12P48065 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A12P48065 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A12P48065 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A12P48065 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SLC6A12P48065 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
SLC6A12P48065 AC092720.2-201ENST00000602388 1665 ntBASIC19.8■□□□□ 0.76
SLC6A12P48065 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms