Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 TOF1YNL273W 3717 nt2.38□□□□□ -2.03
SSN8P47821 APC2YLR127C 2562 nt2.38□□□□□ -2.03
SSN8P47821 GPI19YDR437W 423 nt2.38□□□□□ -2.03
SSN8P47821 YAL026C-AYAL026C-A 438 nt2.38□□□□□ -2.03
SSN8P47821 GPI14YJR013W 1212 nt2.38□□□□□ -2.03
SSN8P47821 YAL042C-AYAL042C-A 378 nt2.38□□□□□ -2.03
SSN8P47821 YPL205CYPL205C 345 nt2.38□□□□□ -2.03
SSN8P47821 TRM2YKR056W 1920 nt2.38□□□□□ -2.03
SSN8P47821 YNL034WYNL034W 1839 nt2.38□□□□□ -2.03
SSN8P47821 SPF1YEL031W 3648 nt2.37□□□□□ -2.03
SSN8P47821 SPE1YKL184W 1401 nt2.37□□□□□ -2.03
SSN8P47821 MRP10YDL045W-A 288 nt2.37□□□□□ -2.03
SSN8P47821 BNA7YDR428C 786 nt2.37□□□□□ -2.03
SSN8P47821 ERP6YGL002W 651 nt2.37□□□□□ -2.03
SSN8P47821 YGL165CYGL165C 579 nt2.37□□□□□ -2.03
SSN8P47821 NOP19YGR251W 591 nt2.37□□□□□ -2.03
SSN8P47821 PEP8YJL053W 1140 nt2.37□□□□□ -2.03
SSN8P47821 PKR1YMR123W 369 nt2.37□□□□□ -2.03
SSN8P47821 NSL1YPL233W 651 nt2.37□□□□□ -2.03
SSN8P47821 TPS2YDR074W 2691 nt2.36□□□□□ -2.03
SSN8P47821 MUD2YKL074C 1584 nt2.36□□□□□ -2.03
SSN8P47821 SIP3YNL257C 3690 nt2.36□□□□□ -2.03
SSN8P47821 GCV2YMR189W 3105 nt2.36□□□□□ -2.03
SSN8P47821 YCR081C-AYCR081C-A 237 nt2.36□□□□□ -2.03
SSN8P47821 YER107W-AYER107W-A 321 nt2.36□□□□□ -2.03
SSN8P47821 BI2Q0110 1272 nt2.36□□□□□ -2.03
SSN8P47821 RPL29YFR032C-A 180 nt2.36□□□□□ -2.03
SSN8P47821 YIL030W-AYIL030W-A 339 nt2.36□□□□□ -2.03
SSN8P47821 YJL007CYJL007C 315 nt2.36□□□□□ -2.03
SSN8P47821 AIM29YKR074W 468 nt2.36□□□□□ -2.03
SSN8P47821 YNL046WYNL046W 519 nt2.36□□□□□ -2.03
SSN8P47821 COQ10YOL008W 624 nt2.36□□□□□ -2.03
SSN8P47821 DAD3YBR233W-A 285 nt2.36□□□□□ -2.03
SSN8P47821 MRD1YPR112C 2664 nt2.36□□□□□ -2.03
SSN8P47821 FAR11YNL127W 2862 nt2.36□□□□□ -2.03
SSN8P47821 YOR192C-AYOR192C-A 1317 nt2.36□□□□□ -2.03
SSN8P47821 NEW1YPL226W 3591 nt2.36□□□□□ -2.03
SSN8P47821 AXL1YPR122W 3627 nt2.35□□□□□ -2.03
SSN8P47821 RTT10YPL183C 3042 nt2.35□□□□□ -2.03
SSN8P47821 BCK1YJL095W 4437 nt2.35□□□□□ -2.03
SSN8P47821 HMLALPHA2YCL067C 633 nt2.35□□□□□ -2.03
SSN8P47821 MATALPHA2YCR039C 633 nt2.35□□□□□ -2.03
SSN8P47821 YFL019CYFL019C 354 nt2.35□□□□□ -2.03
SSN8P47821 RPL14BYHL001W 417 nt2.35□□□□□ -2.03
SSN8P47821 YKL165C-AYKL165C-A 234 nt2.35□□□□□ -2.03
SSN8P47821 RPS29AYLR388W 171 nt2.35□□□□□ -2.03
SSN8P47821 ATP15YPL271W 189 nt2.35□□□□□ -2.03
SSN8P47821 snR41snR41 95 nt2.35□□□□□ -2.03
SSN8P47821 PUF4YGL014W 2667 nt2.35□□□□□ -2.03
SSN8P47821 YIL166CYIL166C 1629 nt2.35□□□□□ -2.03
SSN8P47821 FUS1YCL027W 1539 nt2.34□□□□□ -2.03
SSN8P47821 YGR121W-AYGR121W-A 216 nt2.34□□□□□ -2.03
SSN8P47821 YJL127C-BYJL127C-B 159 nt2.34□□□□□ -2.03
SSN8P47821 YKL033W-AYKL033W-A 711 nt2.34□□□□□ -2.03
SSN8P47821 YLR171WYLR171W 390 nt2.34□□□□□ -2.03
SSN8P47821 RRT1YBL048W 312 nt2.34□□□□□ -2.03
SSN8P47821 RPL25YOL127W 429 nt2.34□□□□□ -2.03
SSN8P47821 NPR1YNL183C 2373 nt2.34□□□□□ -2.04
SSN8P47821 SPB1YCL054W 2526 nt2.33□□□□□ -2.04
SSN8P47821 YDR098C-BYDR098C-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YDR210C-DYDR210C-D 5268 nt2.33□□□□□ -2.04
SSN8P47821 YDR316W-BYDR316W-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YDR365W-BYDR365W-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YER138CYER138C 5268 nt2.33□□□□□ -2.04
SSN8P47821 YER160CYER160C 5268 nt2.33□□□□□ -2.04
SSN8P47821 YGR038C-BYGR038C-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YGR161C-DYGR161C-D 5268 nt2.33□□□□□ -2.04
SSN8P47821 YJR027WYJR027W 5268 nt2.33□□□□□ -2.04
SSN8P47821 YLR157C-BYLR157C-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YML039WYML039W 5268 nt2.33□□□□□ -2.04
SSN8P47821 YML045WYML045W 5268 nt2.33□□□□□ -2.04
SSN8P47821 YMR050CYMR050C 5268 nt2.33□□□□□ -2.04
SSN8P47821 YOL103W-BYOL103W-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YBR012W-BYBR012W-B 5271 nt2.33□□□□□ -2.04
SSN8P47821 YOR142W-BYOR142W-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YPL257W-BYPL257W-B 5268 nt2.33□□□□□ -2.04
SSN8P47821 YPR158W-BYPR158W-B 5271 nt2.33□□□□□ -2.04
SSN8P47821 ADK1YDR226W 669 nt2.33□□□□□ -2.04
SSN8P47821 RPS17BYDR447C 411 nt2.33□□□□□ -2.04
SSN8P47821 TSA2YDR453C 591 nt2.33□□□□□ -2.04
SSN8P47821 YPS5YGL259W 498 nt2.33□□□□□ -2.04
SSN8P47821 YHR130CYHR130C 336 nt2.33□□□□□ -2.04
SSN8P47821 RPI1YIL119C 1224 nt2.33□□□□□ -2.04
SSN8P47821 YJR079WYJR079W 330 nt2.33□□□□□ -2.04
SSN8P47821 JIP3YLR331C 378 nt2.33□□□□□ -2.04
SSN8P47821 YML037CYML037C 1023 nt2.33□□□□□ -2.04
SSN8P47821 FPR1YNL135C 345 nt2.33□□□□□ -2.04
SSN8P47821 ISU1YPL135W 498 nt2.33□□□□□ -2.04
SSN8P47821 SNX41YDR425W 1878 nt2.33□□□□□ -2.04
SSN8P47821 GDS1YOR355W 1569 nt2.32□□□□□ -2.04
SSN8P47821 YDR186CYDR186C 2634 nt2.32□□□□□ -2.04
SSN8P47821 DPB11YJL090C 2295 nt2.32□□□□□ -2.04
SSN8P47821 IRC4YDR540C 540 nt2.32□□□□□ -2.04
SSN8P47821 GLC7YER133W 939 nt2.32□□□□□ -2.04
SSN8P47821 YHR180W-AYHR180W-A 183 nt2.32□□□□□ -2.04
SSN8P47821 YKL202WYKL202W 582 nt2.32□□□□□ -2.04
SSN8P47821 YLR264C-AYLR264C-A 117 nt2.32□□□□□ -2.04
SSN8P47821 RGM1YMR182C 636 nt2.32□□□□□ -2.04
SSN8P47821 RPS7BYNL096C 573 nt2.32□□□□□ -2.04
SSN8P47821 YOL134CYOL134C 390 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms