Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.75■□□□□ 0.27
NKX2-1P43699 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.75■□□□□ 0.27
NKX2-1P43699 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.75■□□□□ 0.27
NKX2-1P43699 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NKX2-1P43699 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.75■□□□□ 0.27
NKX2-1P43699 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
NKX2-1P43699 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-1P43699 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 BX323043.1-201ENST00000641006 1765 ntBASIC16.74■□□□□ 0.27
NKX2-1P43699 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NKX2-1P43699 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.74■□□□□ 0.27
NKX2-1P43699 UNC93B8-201ENST00000511903 705 ntBASIC16.74■□□□□ 0.27
NKX2-1P43699 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.74■□□□□ 0.27
NKX2-1P43699 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.74■□□□□ 0.27
NKX2-1P43699 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NKX2-1P43699 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.74■□□□□ 0.27
NKX2-1P43699 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
NKX2-1P43699 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 HCG11-201ENST00000411553 5696 ntBASIC16.74■□□□□ 0.27
NKX2-1P43699 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-1P43699 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NKX2-1P43699 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 TCF3P1-201ENST00000423021 1937 ntBASIC16.73■□□□□ 0.27
NKX2-1P43699 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NKX2-1P43699 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.73■□□□□ 0.27
NKX2-1P43699 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-1P43699 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX2-1P43699 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NKX2-1P43699 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-1P43699 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-1P43699 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NKX2-1P43699 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-1P43699 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX2-1P43699 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NKX2-1P43699 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 AC116562.4-201ENST00000641316 2276 ntBASIC16.72■□□□□ 0.27
NKX2-1P43699 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-1P43699 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NKX2-1P43699 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 AC011484.1-201ENST00000377652 1995 ntBASIC16.72■□□□□ 0.27
NKX2-1P43699 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 GUSBP5-201ENST00000418136 578 ntBASIC16.72■□□□□ 0.27
NKX2-1P43699 KRT16P3-201ENST00000439127 1283 ntBASIC16.72■□□□□ 0.27
NKX2-1P43699 SRD5A1P1-201ENST00000442297 786 ntBASIC16.72■□□□□ 0.27
NKX2-1P43699 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-1P43699 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-1P43699 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX2-1P43699 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-1P43699 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NKX2-1P43699 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-1P43699 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-1P43699 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms