Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CASP3P42574 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP3P42574 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.14■□□□□ 0.65
CASP3P42574 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CASP3P42574 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.14■□□□□ 0.65
CASP3P42574 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP3P42574 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASP3P42574 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.14■□□□□ 0.65
CASP3P42574 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.14■□□□□ 0.65
CASP3P42574 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.14■□□□□ 0.65
CASP3P42574 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.14■□□□□ 0.65
CASP3P42574 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP3P42574 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CASP3P42574 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP3P42574 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP3P42574 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CASP3P42574 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.13■□□□□ 0.65
CASP3P42574 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CASP3P42574 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.13■□□□□ 0.65
CASP3P42574 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.13■□□□□ 0.65
CASP3P42574 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CASP3P42574 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.13■□□□□ 0.65
CASP3P42574 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CASP3P42574 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASP3P42574 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CASP3P42574 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASP3P42574 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CASP3P42574 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASP3P42574 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
CASP3P42574 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASP3P42574 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
CASP3P42574 RBM17P2-201ENST00000616397 1405 ntBASIC19.12■□□□□ 0.65
CASP3P42574 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.12■□□□□ 0.65
CASP3P42574 AC007322.1-201ENST00000426983 750 ntBASIC19.12■□□□□ 0.65
CASP3P42574 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.12■□□□□ 0.65
CASP3P42574 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.12■□□□□ 0.65
CASP3P42574 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CASP3P42574 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.12■□□□□ 0.65
CASP3P42574 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.12■□□□□ 0.65
CASP3P42574 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.12■□□□□ 0.65
CASP3P42574 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CASP3P42574 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CASP3P42574 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.11■□□□□ 0.65
CASP3P42574 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.11■□□□□ 0.65
CASP3P42574 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.11■□□□□ 0.65
CASP3P42574 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CASP3P42574 CNN2P6-201ENST00000439038 900 ntBASIC19.11■□□□□ 0.65
CASP3P42574 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.11■□□□□ 0.65
CASP3P42574 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.11■□□□□ 0.65
CASP3P42574 AC243732.1-201ENST00000612648 864 ntBASIC19.11■□□□□ 0.65
CASP3P42574 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.11■□□□□ 0.65
CASP3P42574 AC013268.1-206ENST00000638368 961 ntBASIC19.11■□□□□ 0.65
CASP3P42574 AC112229.1-201ENST00000639295 961 ntBASIC19.11■□□□□ 0.65
CASP3P42574 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CASP3P42574 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.11■□□□□ 0.65
CASP3P42574 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
CASP3P42574 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASP3P42574 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.11■□□□□ 0.65
CASP3P42574 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.11■□□□□ 0.65
CASP3P42574 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CASP3P42574 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.1■□□□□ 0.65
CASP3P42574 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.1■□□□□ 0.65
CASP3P42574 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.1■□□□□ 0.65
CASP3P42574 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.1■□□□□ 0.65
CASP3P42574 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.1■□□□□ 0.65
CASP3P42574 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CASP3P42574 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.1■□□□□ 0.65
CASP3P42574 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASP3P42574 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms