Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.45■□□□□ 0.7
RPL3P39023 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.45■□□□□ 0.7
RPL3P39023 AC092720.2-201ENST00000602388 1665 ntBASIC19.45■□□□□ 0.7
RPL3P39023 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL3P39023 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.45■□□□□ 0.7
RPL3P39023 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RPL3P39023 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.44■□□□□ 0.7
RPL3P39023 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
RPL3P39023 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPL3P39023 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL3P39023 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
RPL3P39023 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL3P39023 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RPL3P39023 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 MIR2861-201ENST00000636310 90 ntBASIC19.43■□□□□ 0.7
RPL3P39023 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RPL3P39023 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPL3P39023 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPL3P39023 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL3P39023 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPL3P39023 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPL3P39023 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RPL3P39023 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL3P39023 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.43■□□□□ 0.7
RPL3P39023 AC004854.2-201ENST00000608450 1441 ntBASIC19.42■□□□□ 0.7
RPL3P39023 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.42■□□□□ 0.7
RPL3P39023 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.42■□□□□ 0.7
RPL3P39023 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RPL3P39023 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.42■□□□□ 0.7
RPL3P39023 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RPL3P39023 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPL3P39023 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL3P39023 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPL3P39023 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL3P39023 RBM17P2-201ENST00000616397 1405 ntBASIC19.42■□□□□ 0.7
RPL3P39023 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
RPL3P39023 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RPL3P39023 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 AC007322.3-201ENST00000426526 701 ntBASIC19.41■□□□□ 0.7
RPL3P39023 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RPL3P39023 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RPL3P39023 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
RPL3P39023 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RPL3P39023 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL3P39023 SLC25A24-204ENST00000569674 2357 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms