Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 COX3Q0275 810 nt1.78□□□□□ -2.12
SSH1P38353 CAP1YKL007W 807 nt1.78□□□□□ -2.12
SSH1P38353 YMR247W-AYMR247W-A 144 nt1.78□□□□□ -2.12
SSH1P38353 BUD2YKL092C 3315 nt1.78□□□□□ -2.13
SSH1P38353 YCR099CYCR099C 468 nt1.77□□□□□ -2.13
SSH1P38353 YEL057CYEL057C 702 nt1.77□□□□□ -2.13
SSH1P38353 LOC1YFR001W 615 nt1.77□□□□□ -2.13
SSH1P38353 YGL165CYGL165C 579 nt1.77□□□□□ -2.13
SSH1P38353 RPA34YJL148W 702 nt1.77□□□□□ -2.13
SSH1P38353 ATP7YKL016C 525 nt1.77□□□□□ -2.13
SSH1P38353 RLP24YLR009W 600 nt1.77□□□□□ -2.13
SSH1P38353 RPS22BYLR367W 393 nt1.77□□□□□ -2.13
SSH1P38353 PAI3YMR174C 207 nt1.77□□□□□ -2.13
SSH1P38353 BRX1YOL077C 876 nt1.77□□□□□ -2.13
SSH1P38353 SFM1YOR021C 642 nt1.77□□□□□ -2.13
SSH1P38353 YPL119C-AYPL119C-A 264 nt1.77□□□□□ -2.13
SSH1P38353 YBR197CYBR197C 654 nt1.77□□□□□ -2.13
SSH1P38353 VPS38YLR360W 1320 nt1.76□□□□□ -2.13
SSH1P38353 YGL230CYGL230C 444 nt1.76□□□□□ -2.13
SSH1P38353 YHR050W-AYHR050W-A 171 nt1.76□□□□□ -2.13
SSH1P38353 TMA10YLR327C 261 nt1.76□□□□□ -2.13
SSH1P38353 VTI1YMR197C 654 nt1.76□□□□□ -2.13
SSH1P38353 YBL068W-AYBL068W-A 237 nt1.76□□□□□ -2.13
SSH1P38353 YOR169CYOR169C 465 nt1.76□□□□□ -2.13
SSH1P38353 ADF1YCL058W-A 342 nt1.76□□□□□ -2.13
SSH1P38353 RNH70YGR276C 1662 nt1.76□□□□□ -2.13
SSH1P38353 IPT1YDR072C 1584 nt1.76□□□□□ -2.13
SSH1P38353 YDR261W-AYDR261W-A 1317 nt1.75□□□□□ -2.13
SSH1P38353 BRP1YGL007W 378 nt1.75□□□□□ -2.13
SSH1P38353 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
SSH1P38353 YLR217WYLR217W 324 nt1.75□□□□□ -2.13
SSH1P38353 YLR285C-AYLR285C-A 171 nt1.75□□□□□ -2.13
SSH1P38353 RPS16AYMR143W 432 nt1.75□□□□□ -2.13
SSH1P38353 RIO2YNL207W 1278 nt1.75□□□□□ -2.13
SSH1P38353 ATX2YOR079C 942 nt1.75□□□□□ -2.13
SSH1P38353 VID24YBR105C 1089 nt1.75□□□□□ -2.13
SSH1P38353 YMR045CYMR045C 5268 nt1.75□□□□□ -2.13
SSH1P38353 GIP3YPL137C 3831 nt1.75□□□□□ -2.13
SSH1P38353 YNL034WYNL034W 1839 nt1.75□□□□□ -2.13
SSH1P38353 NCS2YNL119W 1482 nt1.75□□□□□ -2.13
SSH1P38353 YDL118WYDL118W 381 nt1.74□□□□□ -2.13
SSH1P38353 YHR210CYHR210C 1026 nt1.74□□□□□ -2.13
SSH1P38353 YJL086CYJL086C 369 nt1.74□□□□□ -2.13
SSH1P38353 VPS63YLR261C 327 nt1.74□□□□□ -2.13
SSH1P38353 REV1YOR346W 2958 nt1.74□□□□□ -2.13
SSH1P38353 CDC37YDR168W 1521 nt1.74□□□□□ -2.13
SSH1P38353 RTT101YJL047C 2529 nt1.74□□□□□ -2.13
SSH1P38353 SET2YJL168C 2202 nt1.74□□□□□ -2.13
SSH1P38353 SSF2YDR312W 1362 nt1.73□□□□□ -2.13
SSH1P38353 YER172C-AYER172C-A 381 nt1.73□□□□□ -2.13
SSH1P38353 SIP18YMR175W 240 nt1.73□□□□□ -2.13
SSH1P38353 DCP1YOL149W 696 nt1.73□□□□□ -2.13
SSH1P38353 MET18YIL128W 3099 nt1.73□□□□□ -2.13
SSH1P38353 15S_rRNA15S_rRNA 1649 nt1.73□□□□□ -2.13
SSH1P38353 MES1YGR264C 2256 nt1.73□□□□□ -2.13
SSH1P38353 YDR248CYDR248C 582 nt1.72□□□□□ -2.13
SSH1P38353 SHE2YKL130C 741 nt1.72□□□□□ -2.13
SSH1P38353 YLR379WYLR379W 375 nt1.72□□□□□ -2.13
SSH1P38353 GIM3YNL153C 390 nt1.72□□□□□ -2.13
SSH1P38353 YNL179CYNL179C 438 nt1.72□□□□□ -2.13
SSH1P38353 ECM25YJL201W 1800 nt1.72□□□□□ -2.13
SSH1P38353 CDC60YPL160W 3273 nt1.72□□□□□ -2.13
SSH1P38353 VPS8YAL002W 3825 nt1.71□□□□□ -2.14
SSH1P38353 PES4YFR023W 1836 nt1.71□□□□□ -2.14
SSH1P38353 YJL133C-AYJL133C-A 225 nt1.71□□□□□ -2.14
SSH1P38353 YLR307C-AYLR307C-A 264 nt1.71□□□□□ -2.14
SSH1P38353 NSL1YPL233W 651 nt1.71□□□□□ -2.14
SSH1P38353 MUD1YBR119W 897 nt1.71□□□□□ -2.14
SSH1P38353 BAS1YKR099W 2436 nt1.71□□□□□ -2.14
SSH1P38353 RUD3YOR216C 1455 nt1.7□□□□□ -2.14
SSH1P38353 RRP6YOR001W 2202 nt1.7□□□□□ -2.14
SSH1P38353 IRC4YDR540C 540 nt1.7□□□□□ -2.14
SSH1P38353 EMP24YGL200C 612 nt1.7□□□□□ -2.14
SSH1P38353 SDL1YIL167W 633 nt1.7□□□□□ -2.14
SSH1P38353 YPT6YLR262C 648 nt1.7□□□□□ -2.14
SSH1P38353 HRI1YLR301W 735 nt1.7□□□□□ -2.14
SSH1P38353 YMR144WYMR144W 1029 nt1.7□□□□□ -2.14
SSH1P38353 YOL150CYOL150C 312 nt1.7□□□□□ -2.14
SSH1P38353 CFT2YLR115W 2580 nt1.7□□□□□ -2.14
SSH1P38353 NAN1YPL126W 2691 nt1.7□□□□□ -2.14
SSH1P38353 UBR2YLR024C 5619 nt1.69□□□□□ -2.14
SSH1P38353 YHR214C-BYHR214C-B 5382 nt1.69□□□□□ -2.14
SSH1P38353 YNL144CYNL144C 2223 nt1.69□□□□□ -2.14
SSH1P38353 YDL163WYDL163W 303 nt1.69□□□□□ -2.14
SSH1P38353 PEA2YER149C 1263 nt1.69□□□□□ -2.14
SSH1P38353 YFR056CYFR056C 369 nt1.69□□□□□ -2.14
SSH1P38353 YGL042CYGL042C 306 nt1.69□□□□□ -2.14
SSH1P38353 YGR226CYGR226C 210 nt1.69□□□□□ -2.14
SSH1P38353 PRS3YHL011C 963 nt1.69□□□□□ -2.14
SSH1P38353 LIN1YHR156C 1023 nt1.69□□□□□ -2.14
SSH1P38353 YIR020C-BYIR020C-B 735 nt1.69□□□□□ -2.14
SSH1P38353 ARL3YPL051W 597 nt1.69□□□□□ -2.14
SSH1P38353 RTT107YHR154W 3213 nt1.69□□□□□ -2.14
SSH1P38353 SSF1YHR066W 1362 nt1.69□□□□□ -2.14
SSH1P38353 GYP5YPL249C 2685 nt1.69□□□□□ -2.14
SSH1P38353 TUS1YLR425W 3924 nt1.69□□□□□ -2.14
SSH1P38353 URK1YNR012W 1506 nt1.68□□□□□ -2.14
SSH1P38353 DAD1YDR016C 285 nt1.68□□□□□ -2.14
SSH1P38353 YJL047C-AYJL047C-A 135 nt1.68□□□□□ -2.14
SSH1P38353 IPP1YBR011C 864 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 100.3 ms