Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MMP23A-201ENST00000234610 1017 ntBASIC20.46■□□□□ 0.87
HOXA6P31267 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA6P31267 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXA6P31267 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA6P31267 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA6P31267 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA6P31267 AP003071.4-201ENST00000562276 1284 ntBASIC20.46■□□□□ 0.87
HOXA6P31267 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA6P31267 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.46■□□□□ 0.87
HOXA6P31267 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 AC127496.7-201ENST00000625110 1798 ntBASIC20.46■□□□□ 0.87
HOXA6P31267 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA6P31267 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
HOXA6P31267 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA6P31267 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXA6P31267 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA6P31267 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA6P31267 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA6P31267 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA6P31267 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXA6P31267 AL353807.1-201ENST00000427475 662 ntBASIC20.45■□□□□ 0.86
HOXA6P31267 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HOXA6P31267 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXA6P31267 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
HOXA6P31267 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HOXA6P31267 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXA6P31267 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HOXA6P31267 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HOXA6P31267 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXA6P31267 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXA6P31267 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.44■□□□□ 0.86
HOXA6P31267 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXA6P31267 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXA6P31267 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.44■□□□□ 0.86
HOXA6P31267 AF186192.3-201ENST00000583427 947 ntBASIC20.44■□□□□ 0.86
HOXA6P31267 AL356652.1-201ENST00000615962 565 ntBASIC20.44■□□□□ 0.86
HOXA6P31267 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HOXA6P31267 AL121829.2-201ENST00000620908 328 ntBASIC20.44■□□□□ 0.86
HOXA6P31267 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXA6P31267 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
HOXA6P31267 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXA6P31267 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXA6P31267 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXA6P31267 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXA6P31267 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HOXA6P31267 AL355355.2-201ENST00000442321 338 ntBASIC20.43■□□□□ 0.86
HOXA6P31267 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXA6P31267 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXA6P31267 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.43■□□□□ 0.86
HOXA6P31267 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXA6P31267 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXA6P31267 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXA6P31267 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXA6P31267 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXA6P31267 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXA6P31267 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXA6P31267 KRT16P5-201ENST00000455284 522 ntBASIC20.42■□□□□ 0.86
HOXA6P31267 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXA6P31267 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 AL590326.2-201ENST00000625139 305 ntBASIC20.42■□□□□ 0.86
HOXA6P31267 AC092865.7-201ENST00000641832 219 ntBASIC20.42■□□□□ 0.86
HOXA6P31267 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXA6P31267 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXA6P31267 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXA6P31267 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXA6P31267 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXA6P31267 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXA6P31267 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXA6P31267 KRT18P35-201ENST00000510488 1269 ntBASIC20.41■□□□□ 0.86
HOXA6P31267 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXA6P31267 RN7SL850P-201ENST00000579959 291 ntBASIC20.41■□□□□ 0.86
HOXA6P31267 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXA6P31267 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXA6P31267 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HOXA6P31267 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXA6P31267 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms