Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 PTPA-214ENST00000423100 988 ntTSL 2 BASIC27.3■■□□□ 1.96
RXRBP28702 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC27.3■■□□□ 1.96
RXRBP28702 AC006538.3-201ENST00000612495 578 ntBASIC27.3■■□□□ 1.96
RXRBP28702 AL121749.1-202ENST00000609313 2153 ntBASIC27.3■■□□□ 1.96
RXRBP28702 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
RXRBP28702 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.3■■□□□ 1.96
RXRBP28702 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RXRBP28702 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC27.29■■□□□ 1.96
RXRBP28702 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
RXRBP28702 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC27.29■■□□□ 1.96
RXRBP28702 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RXRBP28702 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC27.29■■□□□ 1.96
RXRBP28702 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC27.29■■□□□ 1.96
RXRBP28702 AC093458.2-201ENST00000623150 629 ntBASIC27.29■■□□□ 1.96
RXRBP28702 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.29■■□□□ 1.96
RXRBP28702 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RXRBP28702 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RXRBP28702 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RXRBP28702 MOK-233ENST00000524214 1539 ntTSL 2 BASIC27.28■■□□□ 1.96
RXRBP28702 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.28■■□□□ 1.96
RXRBP28702 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RXRBP28702 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC27.28■■□□□ 1.96
RXRBP28702 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RXRBP28702 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RXRBP28702 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC27.28■■□□□ 1.96
RXRBP28702 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC27.28■■□□□ 1.96
RXRBP28702 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC27.28■■□□□ 1.96
RXRBP28702 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC27.28■■□□□ 1.96
RXRBP28702 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RXRBP28702 AL121829.2-201ENST00000620908 328 ntBASIC27.28■■□□□ 1.96
RXRBP28702 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
RXRBP28702 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC27.27■■□□□ 1.96
RXRBP28702 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RXRBP28702 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RXRBP28702 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
RXRBP28702 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC27.27■■□□□ 1.96
RXRBP28702 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RXRBP28702 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC27.27■■□□□ 1.96
RXRBP28702 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
RXRBP28702 ECEL1P2-202ENST00000465689 757 ntBASIC27.27■■□□□ 1.96
RXRBP28702 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC27.27■■□□□ 1.96
RXRBP28702 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RXRBP28702 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RXRBP28702 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC27.27■■□□□ 1.96
RXRBP28702 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RXRBP28702 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RXRBP28702 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.26■■□□□ 1.96
RXRBP28702 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.26■■□□□ 1.95
RXRBP28702 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RXRBP28702 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
RXRBP28702 AP000593.1-201ENST00000393668 712 ntBASIC27.26■■□□□ 1.95
RXRBP28702 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
RXRBP28702 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC27.26■■□□□ 1.95
RXRBP28702 AC091390.4-202ENST00000476426 537 ntBASIC27.26■■□□□ 1.95
RXRBP28702 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RXRBP28702 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RXRBP28702 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RXRBP28702 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.26■■□□□ 1.95
RXRBP28702 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC27.26■■□□□ 1.95
RXRBP28702 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RXRBP28702 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RXRBP28702 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
RXRBP28702 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RXRBP28702 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RXRBP28702 PCED1CP-201ENST00000419887 785 ntBASIC27.25■■□□□ 1.95
RXRBP28702 AC117947.1-201ENST00000427448 529 ntBASIC27.25■■□□□ 1.95
RXRBP28702 F2R-202ENST00000505600 442 ntTSL 2 BASIC27.25■■□□□ 1.95
RXRBP28702 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
RXRBP28702 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RXRBP28702 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.25■■□□□ 1.95
RXRBP28702 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RXRBP28702 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC27.24■■□□□ 1.95
RXRBP28702 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC27.24■■□□□ 1.95
RXRBP28702 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.24■■□□□ 1.95
RXRBP28702 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC27.24■■□□□ 1.95
RXRBP28702 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 HCG4P8-203ENST00000443049 980 ntBASIC27.24■■□□□ 1.95
RXRBP28702 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC27.24■■□□□ 1.95
RXRBP28702 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC27.24■■□□□ 1.95
RXRBP28702 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
RXRBP28702 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RXRBP28702 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RXRBP28702 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RXRBP28702 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RXRBP28702 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RXRBP28702 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms