Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.1■□□□□ 0.81
VARSP26640 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
VARSP26640 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
VARSP26640 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.09■□□□□ 0.81
VARSP26640 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 LINC01006-201ENST00000333319 2292 ntBASIC20.09■□□□□ 0.81
VARSP26640 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
VARSP26640 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VARSP26640 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
VARSP26640 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 KRT19P1-201ENST00000405746 1186 ntBASIC20.09■□□□□ 0.81
VARSP26640 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.09■□□□□ 0.81
VARSP26640 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 BID-214ENST00000617586 542 ntTSL 5 BASIC20.09■□□□□ 0.81
VARSP26640 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.09■□□□□ 0.81
VARSP26640 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
VARSP26640 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
VARSP26640 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARSP26640 FEM1AP1-201ENST00000431297 1995 ntBASIC20.08■□□□□ 0.81
VARSP26640 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.08■□□□□ 0.81
VARSP26640 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARSP26640 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VARSP26640 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.08■□□□□ 0.81
VARSP26640 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARSP26640 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.08■□□□□ 0.81
VARSP26640 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.08■□□□□ 0.81
VARSP26640 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARSP26640 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.08■□□□□ 0.81
VARSP26640 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VARSP26640 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.08■□□□□ 0.81
VARSP26640 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.08■□□□□ 0.81
VARSP26640 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARSP26640 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.08■□□□□ 0.81
VARSP26640 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VARSP26640 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARSP26640 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
VARSP26640 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARSP26640 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARSP26640 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VARSP26640 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VARSP26640 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
VARSP26640 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.07■□□□□ 0.8
VARSP26640 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.07■□□□□ 0.8
VARSP26640 AC073111.5-205ENST00000641717 521 ntBASIC20.07■□□□□ 0.8
VARSP26640 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
VARSP26640 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARSP26640 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VARSP26640 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VARSP26640 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VARSP26640 KRT16P2-201ENST00000414673 1423 ntBASIC20.06■□□□□ 0.8
VARSP26640 CDCA4P2-201ENST00000441182 718 ntBASIC20.06■□□□□ 0.8
VARSP26640 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 RAP2CP1-201ENST00000605103 478 ntBASIC20.06■□□□□ 0.8
VARSP26640 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.06■□□□□ 0.8
VARSP26640 AC120498.10-201ENST00000621827 505 ntBASIC20.06■□□□□ 0.8
VARSP26640 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
VARSP26640 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.06■□□□□ 0.8
VARSP26640 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARSP26640 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VARSP26640 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
VARSP26640 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VARSP26640 AC006970.2-201ENST00000450065 779 ntBASIC20.05■□□□□ 0.8
VARSP26640 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.05■□□□□ 0.8
VARSP26640 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms