Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.23■□□□□ 0.35
LMO1P25800 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.23■□□□□ 0.35
LMO1P25800 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.23■□□□□ 0.35
LMO1P25800 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO1P25800 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO1P25800 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LMO1P25800 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO1P25800 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LMO1P25800 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO1P25800 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.22■□□□□ 0.35
LMO1P25800 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LMO1P25800 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.22■□□□□ 0.35
LMO1P25800 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO1P25800 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO1P25800 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.21■□□□□ 0.35
LMO1P25800 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO1P25800 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LMO1P25800 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LMO1P25800 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO1P25800 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.21■□□□□ 0.35
LMO1P25800 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LMO1P25800 AC073314.1-201ENST00000568729 2216 ntBASIC17.21■□□□□ 0.35
LMO1P25800 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO1P25800 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LMO1P25800 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LMO1P25800 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LMO1P25800 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LMO1P25800 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.21■□□□□ 0.34
LMO1P25800 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 FP700111.2-201ENST00000619190 1892 ntBASIC17.2■□□□□ 0.34
LMO1P25800 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.2■□□□□ 0.34
LMO1P25800 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.2■□□□□ 0.34
LMO1P25800 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LMO1P25800 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LMO1P25800 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.2■□□□□ 0.34
LMO1P25800 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LMO1P25800 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LMO1P25800 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMO1P25800 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LMO1P25800 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
LMO1P25800 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LMO1P25800 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms