Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YAR060CYAR060C 336 nt1.13□□□□□ -2.23
CDC39P25655 SPC24YMR117C 642 nt1.13□□□□□ -2.23
CDC39P25655 ERG29YMR134W 714 nt1.13□□□□□ -2.23
CDC39P25655 PEP12YOR036W 867 nt1.13□□□□□ -2.23
CDC39P25655 YBR174CYBR174C 315 nt1.13□□□□□ -2.23
CDC39P25655 TRS20YBR254C 528 nt1.13□□□□□ -2.23
CDC39P25655 AI4Q0065 1671 nt1.13□□□□□ -2.23
CDC39P25655 PAF1YBR279W 1338 nt1.13□□□□□ -2.23
CDC39P25655 VPS15YBR097W 4365 nt1.13□□□□□ -2.23
CDC39P25655 PTC5YOR090C 1719 nt1.13□□□□□ -2.23
CDC39P25655 APM3YBR288C 1452 nt1.13□□□□□ -2.23
CDC39P25655 HCS1YKL017C 2052 nt1.13□□□□□ -2.23
CDC39P25655 YDR018CYDR018C 1191 nt1.13□□□□□ -2.23
CDC39P25655 YKR075W-AYKR075W-A 270 nt1.13□□□□□ -2.23
CDC39P25655 ADF1YCL058W-A 342 nt1.13□□□□□ -2.23
CDC39P25655 YDR341CYDR341C 1824 nt1.13□□□□□ -2.23
CDC39P25655 SAY1YGR263C 1275 nt1.12□□□□□ -2.23
CDC39P25655 YHR022CYHR022C 771 nt1.12□□□□□ -2.23
CDC39P25655 YOL024WYOL024W 519 nt1.12□□□□□ -2.23
CDC39P25655 YOL166CYOL166C 339 nt1.12□□□□□ -2.23
CDC39P25655 ARL3YPL051W 597 nt1.12□□□□□ -2.23
CDC39P25655 VPS35YJL154C 2835 nt1.12□□□□□ -2.23
CDC39P25655 UBR2YLR024C 5619 nt1.12□□□□□ -2.23
CDC39P25655 YCR108CYCR108C 192 nt1.12□□□□□ -2.23
CDC39P25655 YER189WYER189W 369 nt1.12□□□□□ -2.23
CDC39P25655 YGR109W-AYGR109W-A 873 nt1.12□□□□□ -2.23
CDC39P25655 YJL015CYJL015C 285 nt1.12□□□□□ -2.23
CDC39P25655 CUP9YPL177C 921 nt1.12□□□□□ -2.23
CDC39P25655 YNL144CYNL144C 2223 nt1.11□□□□□ -2.23
CDC39P25655 YBP2YGL060W 1926 nt1.11□□□□□ -2.23
CDC39P25655 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
CDC39P25655 PBP4YDL053C 558 nt1.11□□□□□ -2.23
CDC39P25655 YDR381C-AYDR381C-A 345 nt1.11□□□□□ -2.23
CDC39P25655 RNR4YGR180C 1038 nt1.11□□□□□ -2.23
CDC39P25655 YKL065W-AYKL065W-A 222 nt1.11□□□□□ -2.23
CDC39P25655 MSA2YKR077W 1092 nt1.11□□□□□ -2.23
CDC39P25655 YNL010WYNL010W 726 nt1.11□□□□□ -2.23
CDC39P25655 PHR1YOR386W 1698 nt1.11□□□□□ -2.23
CDC39P25655 YDR338CYDR338C 2088 nt1.11□□□□□ -2.23
CDC39P25655 YCR087C-AYCR087C-A 462 nt1.1□□□□□ -2.23
CDC39P25655 TSA2YDR453C 591 nt1.1□□□□□ -2.23
CDC39P25655 RPS26BYER131W 360 nt1.1□□□□□ -2.23
CDC39P25655 YGL177WYGL177W 348 nt1.1□□□□□ -2.23
CDC39P25655 HYR1YIR037W 492 nt1.1□□□□□ -2.23
CDC39P25655 CDC37YDR168W 1521 nt1.1□□□□□ -2.23
CDC39P25655 SEC21YNL287W 2808 nt1.1□□□□□ -2.23
CDC39P25655 YJL049WYJL049W 1353 nt1.1□□□□□ -2.23
CDC39P25655 PKH3YDR466W 2697 nt1.1□□□□□ -2.23
CDC39P25655 AIM18YHR198C 966 nt1.1□□□□□ -2.23
CDC39P25655 PDR8YLR266C 2106 nt1.1□□□□□ -2.23
CDC39P25655 IPT1YDR072C 1584 nt1.1□□□□□ -2.23
CDC39P25655 IRE1YHR079C 3348 nt1.1□□□□□ -2.23
CDC39P25655 CFT2YLR115W 2580 nt1.1□□□□□ -2.23
CDC39P25655 YCR090CYCR090C 549 nt1.09□□□□□ -2.23
CDC39P25655 YJL114WYJL114W 681 nt1.09□□□□□ -2.23
CDC39P25655 RPL6BYLR448W 531 nt1.09□□□□□ -2.23
CDC39P25655 YLR419WYLR419W 4308 nt1.09□□□□□ -2.24
CDC39P25655 YPR097WYPR097W 3222 nt1.09□□□□□ -2.24
CDC39P25655 NAM7YMR080C 2916 nt1.09□□□□□ -2.24
CDC39P25655 YCR102W-AYCR102W-A 198 nt1.09□□□□□ -2.24
CDC39P25655 AIM6YDL237W 1173 nt1.09□□□□□ -2.24
CDC39P25655 YER091C-AYER091C-A 222 nt1.09□□□□□ -2.24
CDC39P25655 YIL058WYIL058W 285 nt1.09□□□□□ -2.24
CDC39P25655 SRP21YKL122C 504 nt1.09□□□□□ -2.24
CDC39P25655 TEN1YLR010C 483 nt1.09□□□□□ -2.24
CDC39P25655 RPS10BYMR230W 318 nt1.09□□□□□ -2.24
CDC39P25655 MRPL40YPL173W 894 nt1.09□□□□□ -2.24
CDC39P25655 HSE1YHL002W 1359 nt1.08□□□□□ -2.24
CDC39P25655 MLH3YPL164C 2148 nt1.08□□□□□ -2.24
CDC39P25655 CBF2YGR140W 2871 nt1.08□□□□□ -2.24
CDC39P25655 NAN1YPL126W 2691 nt1.08□□□□□ -2.24
CDC39P25655 VTI1YMR197C 654 nt1.08□□□□□ -2.24
CDC39P25655 YNL089CYNL089C 477 nt1.08□□□□□ -2.24
CDC39P25655 YOL162WYOL162W 648 nt1.08□□□□□ -2.24
CDC39P25655 TAZ1YPR140W 1146 nt1.08□□□□□ -2.24
CDC39P25655 ATG9YDL149W 2994 nt1.08□□□□□ -2.24
CDC39P25655 CDC53YDL132W 2448 nt1.08□□□□□ -2.24
CDC39P25655 UBC5YDR059C 447 nt1.07□□□□□ -2.24
CDC39P25655 RPN9YDR427W 1182 nt1.07□□□□□ -2.24
CDC39P25655 KEG1YFR042W 603 nt1.07□□□□□ -2.24
CDC39P25655 YHL044WYHL044W 708 nt1.07□□□□□ -2.24
CDC39P25655 PFS1YHR185C 714 nt1.07□□□□□ -2.24
CDC39P25655 BLS1YLR408C 369 nt1.07□□□□□ -2.24
CDC39P25655 MRPL44YMR225C 297 nt1.07□□□□□ -2.24
CDC39P25655 YOL150CYOL150C 312 nt1.07□□□□□ -2.24
CDC39P25655 BPH1YCR032W 6504 nt1.07□□□□□ -2.24
CDC39P25655 KCS1YDR017C 3153 nt1.07□□□□□ -2.24
CDC39P25655 YAR009CYAR009C 3591 nt1.07□□□□□ -2.24
CDC39P25655 YCR024C-BYCR024C-B 267 nt1.07□□□□□ -2.24
CDC39P25655 PLP1YDR183W 693 nt1.07□□□□□ -2.24
CDC39P25655 YDR290WYDR290W 330 nt1.07□□□□□ -2.24
CDC39P25655 MAM1YER106W 909 nt1.07□□□□□ -2.24
CDC39P25655 YHL048C-AYHL048C-A 135 nt1.07□□□□□ -2.24
CDC39P25655 RPL16BYNL069C 597 nt1.07□□□□□ -2.24
CDC39P25655 snR34snR34 203 nt1.07□□□□□ -2.24
CDC39P25655 IML1YJR138W 4755 nt1.07□□□□□ -2.24
CDC39P25655 CTF13YMR094W 1437 nt1.06□□□□□ -2.24
CDC39P25655 NGG1YDR176W 2109 nt1.06□□□□□ -2.24
CDC39P25655 YIL020C-AYIL020C-A 339 nt1.06□□□□□ -2.24
CDC39P25655 RPA34YJL148W 702 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms