Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.35■□□□□ 0.37
COL8A2P25067 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.35■□□□□ 0.37
COL8A2P25067 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
COL8A2P25067 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
COL8A2P25067 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.35■□□□□ 0.37
COL8A2P25067 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.35■□□□□ 0.37
COL8A2P25067 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.35■□□□□ 0.37
COL8A2P25067 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.34■□□□□ 0.37
COL8A2P25067 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.34■□□□□ 0.37
COL8A2P25067 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL8A2P25067 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.34■□□□□ 0.37
COL8A2P25067 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 FAM201B-201ENST00000458407 597 ntBASIC17.34■□□□□ 0.37
COL8A2P25067 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.34■□□□□ 0.37
COL8A2P25067 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.34■□□□□ 0.37
COL8A2P25067 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL8A2P25067 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.34■□□□□ 0.37
COL8A2P25067 Z98882.1-201ENST00000622160 2253 ntBASIC17.34■□□□□ 0.37
COL8A2P25067 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.34■□□□□ 0.37
COL8A2P25067 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
COL8A2P25067 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COL8A2P25067 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
COL8A2P25067 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.33■□□□□ 0.37
COL8A2P25067 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL8A2P25067 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.33■□□□□ 0.37
COL8A2P25067 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL8A2P25067 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL8A2P25067 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL8A2P25067 CYP21A1P-202ENST00000354927 1481 ntBASIC17.33■□□□□ 0.37
COL8A2P25067 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.33■□□□□ 0.37
COL8A2P25067 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.33■□□□□ 0.36
COL8A2P25067 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.33■□□□□ 0.36
COL8A2P25067 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.33■□□□□ 0.36
COL8A2P25067 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.33■□□□□ 0.36
COL8A2P25067 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
COL8A2P25067 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.33■□□□□ 0.36
COL8A2P25067 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.33■□□□□ 0.36
COL8A2P25067 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 AL589743.5-201ENST00000616611 1050 ntBASIC17.33■□□□□ 0.36
COL8A2P25067 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.33■□□□□ 0.36
COL8A2P25067 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL8A2P25067 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COL8A2P25067 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.32■□□□□ 0.36
COL8A2P25067 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COL8A2P25067 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.32■□□□□ 0.36
COL8A2P25067 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.32■□□□□ 0.36
COL8A2P25067 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COL8A2P25067 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.32■□□□□ 0.36
COL8A2P25067 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.32■□□□□ 0.36
COL8A2P25067 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COL8A2P25067 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.32■□□□□ 0.36
COL8A2P25067 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL8A2P25067 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COL8A2P25067 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.31■□□□□ 0.36
COL8A2P25067 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.31■□□□□ 0.36
COL8A2P25067 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COL8A2P25067 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.31■□□□□ 0.36
COL8A2P25067 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
COL8A2P25067 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.31■□□□□ 0.36
COL8A2P25067 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.31■□□□□ 0.36
COL8A2P25067 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms