Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.96■□□□□ 0.63
NR4A1P22736 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
NR4A1P22736 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.95■□□□□ 0.62
NR4A1P22736 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NR4A1P22736 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.95■□□□□ 0.62
NR4A1P22736 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.95■□□□□ 0.62
NR4A1P22736 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.95■□□□□ 0.62
NR4A1P22736 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.95■□□□□ 0.62
NR4A1P22736 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.95■□□□□ 0.62
NR4A1P22736 IGHV3-19-201ENST00000521488 291 ntBASIC18.95■□□□□ 0.62
NR4A1P22736 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.95■□□□□ 0.62
NR4A1P22736 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 AC027702.1-201ENST00000563810 1770 ntBASIC18.95■□□□□ 0.62
NR4A1P22736 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.95■□□□□ 0.62
NR4A1P22736 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
NR4A1P22736 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NR4A1P22736 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NR4A1P22736 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR4A1P22736 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NR4A1P22736 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.94■□□□□ 0.62
NR4A1P22736 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 AC068587.7-201ENST00000641602 218 ntBASIC18.94■□□□□ 0.62
NR4A1P22736 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NR4A1P22736 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A1P22736 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.94■□□□□ 0.62
NR4A1P22736 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
NR4A1P22736 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 PLK5-205ENST00000642079 1969 ntBASIC18.93■□□□□ 0.62
NR4A1P22736 SMG8-203ENST00000578922 2178 ntBASIC18.93■□□□□ 0.62
NR4A1P22736 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NR4A1P22736 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.93■□□□□ 0.62
NR4A1P22736 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NR4A1P22736 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NR4A1P22736 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NR4A1P22736 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 TSPY26P-201ENST00000476365 1326 ntBASIC18.93■□□□□ 0.62
NR4A1P22736 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR4A1P22736 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A1P22736 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 AC018445.3-201ENST00000624177 1945 ntBASIC18.92■□□□□ 0.62
NR4A1P22736 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.92■□□□□ 0.62
NR4A1P22736 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.92■□□□□ 0.62
NR4A1P22736 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
NR4A1P22736 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.92■□□□□ 0.62
NR4A1P22736 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A1P22736 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A1P22736 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A1P22736 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms