Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NF1P21359 AC139530.3-201ENST00000620344 690 ntBASIC16.83■□□□□ 0.29
NF1P21359 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NF1P21359 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.83■□□□□ 0.29
NF1P21359 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NF1P21359 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.83■□□□□ 0.28
NF1P21359 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.83■□□□□ 0.28
NF1P21359 KRASP1-201ENST00000407852 552 ntBASIC16.83■□□□□ 0.28
NF1P21359 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
NF1P21359 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.83■□□□□ 0.28
NF1P21359 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.83■□□□□ 0.28
NF1P21359 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NF1P21359 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NF1P21359 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.82■□□□□ 0.28
NF1P21359 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NF1P21359 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NF1P21359 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NF1P21359 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.82■□□□□ 0.28
NF1P21359 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.82■□□□□ 0.28
NF1P21359 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 AC137767.1-201ENST00000602918 1920 ntBASIC16.82■□□□□ 0.28
NF1P21359 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NF1P21359 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
NF1P21359 NUDT16P1-203ENST00000513809 620 ntBASIC16.82■□□□□ 0.28
NF1P21359 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.82■□□□□ 0.28
NF1P21359 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.82■□□□□ 0.28
NF1P21359 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NF1P21359 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NF1P21359 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 UNC93B2-201ENST00000285383 730 ntBASIC16.81■□□□□ 0.28
NF1P21359 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.81■□□□□ 0.28
NF1P21359 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.81■□□□□ 0.28
NF1P21359 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.81■□□□□ 0.28
NF1P21359 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.81■□□□□ 0.28
NF1P21359 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.81■□□□□ 0.28
NF1P21359 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 AC027702.1-201ENST00000563810 1770 ntBASIC16.81■□□□□ 0.28
NF1P21359 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NF1P21359 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 AK4P3-201ENST00000418260 669 ntBASIC16.81■□□□□ 0.28
NF1P21359 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.81■□□□□ 0.28
NF1P21359 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.81■□□□□ 0.28
NF1P21359 AL034346.1-201ENST00000568244 1277 ntBASIC16.81■□□□□ 0.28
NF1P21359 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.81■□□□□ 0.28
NF1P21359 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 AC053503.5-201ENST00000601508 636 ntBASIC16.81■□□□□ 0.28
NF1P21359 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.81■□□□□ 0.28
NF1P21359 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NF1P21359 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.8■□□□□ 0.28
NF1P21359 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NF1P21359 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.8■□□□□ 0.28
NF1P21359 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.8■□□□□ 0.28
NF1P21359 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 AC110285.5-201ENST00000611501 352 ntBASIC16.8■□□□□ 0.28
NF1P21359 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.8■□□□□ 0.28
NF1P21359 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.8■□□□□ 0.28
NF1P21359 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.8■□□□□ 0.28
NF1P21359 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.8■□□□□ 0.28
NF1P21359 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NF1P21359 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.79■□□□□ 0.28
NF1P21359 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NF1P21359 AL390955.1-201ENST00000428694 934 ntBASIC16.79■□□□□ 0.28
NF1P21359 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.79■□□□□ 0.28
NF1P21359 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.79■□□□□ 0.28
NF1P21359 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NF1P21359 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NF1P21359 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NF1P21359 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NF1P21359 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms