Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL11A2P13942 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL11A2P13942 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.41■■□□□ 1.66
COL11A2P13942 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.41■■□□□ 1.66
COL11A2P13942 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.41■■□□□ 1.66
COL11A2P13942 AP001412.1-201ENST00000608405 714 ntBASIC25.41■■□□□ 1.66
COL11A2P13942 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.41■■□□□ 1.66
COL11A2P13942 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL11A2P13942 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.41■■□□□ 1.66
COL11A2P13942 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
COL11A2P13942 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.4■■□□□ 1.66
COL11A2P13942 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.4■■□□□ 1.66
COL11A2P13942 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.4■■□□□ 1.66
COL11A2P13942 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.4■■□□□ 1.66
COL11A2P13942 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
COL11A2P13942 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.4■■□□□ 1.66
COL11A2P13942 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.4■■□□□ 1.66
COL11A2P13942 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
COL11A2P13942 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.4■■□□□ 1.66
COL11A2P13942 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.4■■□□□ 1.66
COL11A2P13942 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
COL11A2P13942 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.4■■□□□ 1.66
COL11A2P13942 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.4■■□□□ 1.66
COL11A2P13942 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL11A2P13942 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COL11A2P13942 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL11A2P13942 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL11A2P13942 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL11A2P13942 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.39■■□□□ 1.65
COL11A2P13942 MIR6786-201ENST00000616843 113 ntBASIC25.39■■□□□ 1.65
COL11A2P13942 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.39■■□□□ 1.65
COL11A2P13942 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL11A2P13942 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
COL11A2P13942 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
COL11A2P13942 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL11A2P13942 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL11A2P13942 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL11A2P13942 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL11A2P13942 KRT8P9-201ENST00000558927 1449 ntBASIC25.38■■□□□ 1.65
COL11A2P13942 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
COL11A2P13942 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.38■■□□□ 1.65
COL11A2P13942 AC026471.5-201ENST00000615068 467 ntBASIC25.38■■□□□ 1.65
COL11A2P13942 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL11A2P13942 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
COL11A2P13942 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.37■■□□□ 1.65
COL11A2P13942 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.37■■□□□ 1.65
COL11A2P13942 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.37■■□□□ 1.65
COL11A2P13942 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL11A2P13942 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL11A2P13942 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL11A2P13942 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
COL11A2P13942 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL11A2P13942 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.37■■□□□ 1.65
COL11A2P13942 PGM5P4-201ENST00000421970 445 ntBASIC25.37■■□□□ 1.65
COL11A2P13942 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL11A2P13942 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.37■■□□□ 1.65
COL11A2P13942 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.37■■□□□ 1.65
COL11A2P13942 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.37■■□□□ 1.65
COL11A2P13942 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.37■■□□□ 1.65
COL11A2P13942 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.36■■□□□ 1.65
COL11A2P13942 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.36■■□□□ 1.65
COL11A2P13942 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.36■■□□□ 1.65
COL11A2P13942 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.36■■□□□ 1.65
COL11A2P13942 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
COL11A2P13942 AP003071.4-201ENST00000562276 1284 ntBASIC25.36■■□□□ 1.65
COL11A2P13942 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.36■■□□□ 1.65
COL11A2P13942 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL11A2P13942 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL11A2P13942 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL11A2P13942 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.35■■□□□ 1.65
COL11A2P13942 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.35■■□□□ 1.65
COL11A2P13942 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
COL11A2P13942 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
COL11A2P13942 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL11A2P13942 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
COL11A2P13942 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
COL11A2P13942 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 NUDT16P1-203ENST00000513809 620 ntBASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms