Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC35.63■■■■□ 3.29
CFTRP13569 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CFTRP13569 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC35.63■■■■□ 3.29
CFTRP13569 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC35.63■■■■□ 3.29
CFTRP13569 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CFTRP13569 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC35.63■■■■□ 3.29
CFTRP13569 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC35.63■■■■□ 3.29
CFTRP13569 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC35.63■■■■□ 3.29
CFTRP13569 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC35.63■■■■□ 3.29
CFTRP13569 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CFTRP13569 KRT8P9-201ENST00000558927 1449 ntBASIC35.62■■■■□ 3.29
CFTRP13569 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CFTRP13569 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC35.62■■■■□ 3.29
CFTRP13569 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC35.61■■■■□ 3.29
CFTRP13569 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CFTRP13569 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CFTRP13569 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CFTRP13569 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC35.61■■■■□ 3.29
CFTRP13569 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CFTRP13569 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CFTRP13569 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CFTRP13569 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC35.6■■■■□ 3.29
CFTRP13569 HES2-206ENST00000489730 730 ntTSL 2 BASIC35.6■■■■□ 3.29
CFTRP13569 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC35.6■■■■□ 3.29
CFTRP13569 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC35.6■■■■□ 3.29
CFTRP13569 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
CFTRP13569 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC35.6■■■■□ 3.29
CFTRP13569 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC35.6■■■■□ 3.29
CFTRP13569 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC35.6■■■■□ 3.29
CFTRP13569 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC35.6■■■■□ 3.29
CFTRP13569 RPS15-203ENST00000586096 570 ntTSL 2 BASIC35.6■■■■□ 3.29
CFTRP13569 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC35.6■■■■□ 3.29
CFTRP13569 AL356652.1-201ENST00000615962 565 ntBASIC35.6■■■■□ 3.29
CFTRP13569 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC35.6■■■■□ 3.29
CFTRP13569 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
CFTRP13569 SRI-203ENST00000419179 1307 ntTSL 2 BASIC35.59■■■■□ 3.29
CFTRP13569 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
CFTRP13569 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC35.59■■■■□ 3.29
CFTRP13569 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CFTRP13569 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC35.59■■■■□ 3.29
CFTRP13569 TPM1-226ENST00000560959 925 ntTSL 2 BASIC35.59■■■■□ 3.29
CFTRP13569 RBM42-202ENST00000586618 771 ntTSL 3 BASIC35.59■■■■□ 3.29
CFTRP13569 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CFTRP13569 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC35.58■■■■□ 3.29
CFTRP13569 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC35.58■■■■□ 3.29
CFTRP13569 AL049597.2-201ENST00000565575 961 ntBASIC35.58■■■■□ 3.29
CFTRP13569 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC35.58■■■■□ 3.29
CFTRP13569 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC35.58■■■■□ 3.29
CFTRP13569 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC35.58■■■■□ 3.29
CFTRP13569 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC35.58■■■■□ 3.29
CFTRP13569 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
CFTRP13569 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC35.57■■■■□ 3.29
CFTRP13569 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.28
CFTRP13569 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.28
CFTRP13569 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC35.57■■■■□ 3.28
CFTRP13569 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
CFTRP13569 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC35.57■■■■□ 3.28
CFTRP13569 RBM17P1-201ENST00000453646 1190 ntBASIC35.57■■■■□ 3.28
CFTRP13569 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC35.57■■■■□ 3.28
CFTRP13569 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
CFTRP13569 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC35.56■■■■□ 3.28
CFTRP13569 AC113347.1-201ENST00000413321 391 ntBASIC35.56■■■■□ 3.28
CFTRP13569 PGM5P4-201ENST00000421970 445 ntBASIC35.56■■■■□ 3.28
CFTRP13569 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC35.56■■■■□ 3.28
CFTRP13569 AL590326.2-201ENST00000625139 305 ntBASIC35.56■■■■□ 3.28
CFTRP13569 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
CFTRP13569 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC35.55■■■■□ 3.28
CFTRP13569 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC35.55■■■■□ 3.28
CFTRP13569 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 FAM99A-202ENST00000538190 1989 ntBASIC35.55■■■■□ 3.28
CFTRP13569 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC35.55■■■■□ 3.28
CFTRP13569 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFTRP13569 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC35.55■■■■□ 3.28
CFTRP13569 AL353807.1-201ENST00000427475 662 ntBASIC35.54■■■■□ 3.28
CFTRP13569 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CFTRP13569 KRT16P5-201ENST00000455284 522 ntBASIC35.54■■■■□ 3.28
CFTRP13569 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CFTRP13569 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CFTRP13569 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC35.54■■■■□ 3.28
CFTRP13569 AC079598.2-202ENST00000546624 1451 ntBASIC35.54■■■■□ 3.28
CFTRP13569 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
CFTRP13569 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
CFTRP13569 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC35.54■■■■□ 3.28
CFTRP13569 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC35.54■■■■□ 3.28
CFTRP13569 ARMC10P1-201ENST00000313754 855 ntBASIC35.54■■■■□ 3.28
CFTRP13569 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC35.54■■■■□ 3.28
CFTRP13569 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC35.54■■■■□ 3.28
CFTRP13569 RNF146-204ENST00000476956 884 ntTSL 2 BASIC35.54■■■■□ 3.28
CFTRP13569 NME3-204ENST00000563498 920 ntTSL 2 BASIC35.54■■■■□ 3.28
CFTRP13569 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC35.54■■■■□ 3.28
CFTRP13569 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC35.54■■■■□ 3.28
CFTRP13569 AL121829.2-201ENST00000620908 328 ntBASIC35.54■■■■□ 3.28
CFTRP13569 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC35.54■■■■□ 3.28
CFTRP13569 HTR7P1-201ENST00000538670 1336 ntBASIC35.53■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms