Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 TRL1YJL087C 2484 nt1.27□□□□□ -2.21
RPL40BP0CH09 HCS1YKL017C 2052 nt1.27□□□□□ -2.21
RPL40BP0CH09 YHR182C-AYHR182C-A 474 nt1.27□□□□□ -2.21
RPL40BP0CH09 RPL6BYLR448W 531 nt1.27□□□□□ -2.21
RPL40BP0CH09 SAR1YPL218W 573 nt1.27□□□□□ -2.21
RPL40BP0CH09 MED8YBR193C 672 nt1.27□□□□□ -2.21
RPL40BP0CH09 RRP6YOR001W 2202 nt1.27□□□□□ -2.21
RPL40BP0CH09 CDC37YDR168W 1521 nt1.26□□□□□ -2.21
RPL40BP0CH09 SRD1YCR018C 666 nt1.26□□□□□ -2.21
RPL40BP0CH09 UBC5YDR059C 447 nt1.26□□□□□ -2.21
RPL40BP0CH09 RMD5YDR255C 1266 nt1.26□□□□□ -2.21
RPL40BP0CH09 YIL012WYIL012W 342 nt1.26□□□□□ -2.21
RPL40BP0CH09 ALB1YJL122W 528 nt1.26□□□□□ -2.21
RPL40BP0CH09 HIT1YJR055W 495 nt1.26□□□□□ -2.21
RPL40BP0CH09 ARC18YLR370C 537 nt1.26□□□□□ -2.21
RPL40BP0CH09 YNR034W-AYNR034W-A 297 nt1.26□□□□□ -2.21
RPL40BP0CH09 GPI17YDR434W 1605 nt1.26□□□□□ -2.21
RPL40BP0CH09 CDC5YMR001C 2118 nt1.25□□□□□ -2.21
RPL40BP0CH09 BRO1YPL084W 2535 nt1.25□□□□□ -2.21
RPL40BP0CH09 SYO1YDL063C 1863 nt1.25□□□□□ -2.21
RPL40BP0CH09 snR63snR63 255 nt1.25□□□□□ -2.21
RPL40BP0CH09 RPL11BYGR085C 525 nt1.25□□□□□ -2.21
RPL40BP0CH09 YHR212CYHR212C 336 nt1.25□□□□□ -2.21
RPL40BP0CH09 TPM2YIL138C 486 nt1.25□□□□□ -2.21
RPL40BP0CH09 YKR075W-AYKR075W-A 270 nt1.25□□□□□ -2.21
RPL40BP0CH09 YLR050CYLR050C 486 nt1.25□□□□□ -2.21
RPL40BP0CH09 YLR169WYLR169W 354 nt1.25□□□□□ -2.21
RPL40BP0CH09 YAR060CYAR060C 336 nt1.25□□□□□ -2.21
RPL40BP0CH09 TEX1YNL253W 1269 nt1.25□□□□□ -2.21
RPL40BP0CH09 RPL11AYPR102C 525 nt1.25□□□□□ -2.21
RPL40BP0CH09 YBR277CYBR277C 402 nt1.25□□□□□ -2.21
RPL40BP0CH09 POL5YEL055C 3069 nt1.24□□□□□ -2.21
RPL40BP0CH09 MFB1YDR219C 1398 nt1.24□□□□□ -2.21
RPL40BP0CH09 SNF12YNR023W 1701 nt1.24□□□□□ -2.21
RPL40BP0CH09 SRB4YER022W 2064 nt1.24□□□□□ -2.21
RPL40BP0CH09 PAU3YCR104W 375 nt1.24□□□□□ -2.21
RPL40BP0CH09 DPP1YDR284C 870 nt1.24□□□□□ -2.21
RPL40BP0CH09 MFA1YDR461W 111 nt1.24□□□□□ -2.21
RPL40BP0CH09 FIP1YJR093C 984 nt1.24□□□□□ -2.21
RPL40BP0CH09 YMR144WYMR144W 1029 nt1.24□□□□□ -2.21
RPL40BP0CH09 MRPL40YPL173W 894 nt1.24□□□□□ -2.21
RPL40BP0CH09 MUM2YBR057C 1101 nt1.24□□□□□ -2.21
RPL40BP0CH09 YIL166CYIL166C 1629 nt1.24□□□□□ -2.21
RPL40BP0CH09 YEA4YEL004W 1029 nt1.23□□□□□ -2.21
RPL40BP0CH09 GLC7YER133W 939 nt1.23□□□□□ -2.21
RPL40BP0CH09 HRT3YLR097C 1035 nt1.23□□□□□ -2.21
RPL40BP0CH09 YNL234WYNL234W 1281 nt1.23□□□□□ -2.21
RPL40BP0CH09 PEX15YOL044W 1152 nt1.23□□□□□ -2.21
RPL40BP0CH09 GRE2YOL151W 1029 nt1.23□□□□□ -2.21
RPL40BP0CH09 TIM18YOR297C 579 nt1.23□□□□□ -2.21
RPL40BP0CH09 UBP16YPL072W 1500 nt1.23□□□□□ -2.21
RPL40BP0CH09 TRM732YMR259C 4263 nt1.23□□□□□ -2.21
RPL40BP0CH09 MDM36YPR083W 1740 nt1.23□□□□□ -2.21
RPL40BP0CH09 MET18YIL128W 3099 nt1.22□□□□□ -2.21
RPL40BP0CH09 TFC8YPL007C 1767 nt1.22□□□□□ -2.21
RPL40BP0CH09 SIP4YJL089W 2490 nt1.22□□□□□ -2.21
RPL40BP0CH09 YLR419WYLR419W 4308 nt1.22□□□□□ -2.21
RPL40BP0CH09 YDL073WYDL073W 2955 nt1.22□□□□□ -2.21
RPL40BP0CH09 SST2YLR452C 2097 nt1.22□□□□□ -2.21
RPL40BP0CH09 YAL034C-BYAL034C-B 354 nt1.21□□□□□ -2.22
RPL40BP0CH09 CTL1YMR180C 963 nt1.21□□□□□ -2.22
RPL40BP0CH09 DYN3YMR299C 939 nt1.21□□□□□ -2.22
RPL40BP0CH09 TYE7YOR344C 876 nt1.21□□□□□ -2.22
RPL40BP0CH09 YDR170W-AYDR170W-A 1323 nt1.2□□□□□ -2.22
RPL40BP0CH09 YNL284C-AYNL284C-A 1323 nt1.2□□□□□ -2.22
RPL40BP0CH09 YCR108CYCR108C 192 nt1.2□□□□□ -2.22
RPL40BP0CH09 SHR3YDL212W 633 nt1.2□□□□□ -2.22
RPL40BP0CH09 YGL006W-AYGL006W-A 111 nt1.2□□□□□ -2.22
RPL40BP0CH09 PGD1YGL025C 1194 nt1.2□□□□□ -2.22
RPL40BP0CH09 YIL141WYIL141W 390 nt1.2□□□□□ -2.22
RPL40BP0CH09 YLR366WYLR366W 306 nt1.2□□□□□ -2.22
RPL40BP0CH09 AHC1YOR023C 1701 nt1.2□□□□□ -2.22
RPL40BP0CH09 snR57snR57 88 nt1.19□□□□□ -2.22
RPL40BP0CH09 YDL186WYDL186W 834 nt1.19□□□□□ -2.22
RPL40BP0CH09 YDR290WYDR290W 330 nt1.19□□□□□ -2.22
RPL40BP0CH09 NCE101YJL205C 162 nt1.19□□□□□ -2.22
RPL40BP0CH09 RPF2YKR081C 1035 nt1.19□□□□□ -2.22
RPL40BP0CH09 FUS2YMR232W 2034 nt1.19□□□□□ -2.22
RPL40BP0CH09 YNL162W-AYNL162W-A 219 nt1.19□□□□□ -2.22
RPL40BP0CH09 HCH1YNL281W 462 nt1.19□□□□□ -2.22
RPL40BP0CH09 HRT1YOL133W 366 nt1.19□□□□□ -2.22
RPL40BP0CH09 NOP12YOL041C 1380 nt1.19□□□□□ -2.22
RPL40BP0CH09 PBY1YBR094W 2262 nt1.18□□□□□ -2.22
RPL40BP0CH09 MAL33YBR297W 1407 nt1.18□□□□□ -2.22
RPL40BP0CH09 PES4YFR023W 1836 nt1.18□□□□□ -2.22
RPL40BP0CH09 YDR124WYDR124W 975 nt1.18□□□□□ -2.22
RPL40BP0CH09 PLP1YDR183W 693 nt1.18□□□□□ -2.22
RPL40BP0CH09 SPO13YHR014W 876 nt1.18□□□□□ -2.22
RPL40BP0CH09 YET2YMR040W 483 nt1.18□□□□□ -2.22
RPL40BP0CH09 ATG5YPL149W 885 nt1.18□□□□□ -2.22
RPL40BP0CH09 AI4Q0065 1671 nt1.18□□□□□ -2.22
RPL40BP0CH09 CDC25YLR310C 4770 nt1.18□□□□□ -2.22
RPL40BP0CH09 ASI3YNL008C 2031 nt1.18□□□□□ -2.22
RPL40BP0CH09 MAD1YGL086W 2250 nt1.18□□□□□ -2.22
RPL40BP0CH09 SRP1YNL189W 1629 nt1.18□□□□□ -2.22
RPL40BP0CH09 SAC3YDR159W 3906 nt1.17□□□□□ -2.22
RPL40BP0CH09 KCS1YDR017C 3153 nt1.17□□□□□ -2.22
RPL40BP0CH09 SPC98YNL126W 2541 nt1.17□□□□□ -2.22
RPL40BP0CH09 KEI1YDR367W 666 nt1.17□□□□□ -2.22
RPL40BP0CH09 YIL020C-AYIL020C-A 339 nt1.17□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 30.6 ms