Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.35■■□□□ 1.97
COL5A2P05997 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL5A2P05997 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.35■■□□□ 1.97
COL5A2P05997 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
COL5A2P05997 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL5A2P05997 TMPOP1-202ENST00000424642 1267 ntBASIC27.34■■□□□ 1.97
COL5A2P05997 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.34■■□□□ 1.97
COL5A2P05997 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.34■■□□□ 1.97
COL5A2P05997 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC27.34■■□□□ 1.97
COL5A2P05997 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC27.34■■□□□ 1.97
COL5A2P05997 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC27.34■■□□□ 1.97
COL5A2P05997 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL5A2P05997 AC026471.5-201ENST00000615068 467 ntBASIC27.34■■□□□ 1.97
COL5A2P05997 AL356652.1-201ENST00000615962 565 ntBASIC27.34■■□□□ 1.97
COL5A2P05997 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC27.34■■□□□ 1.97
COL5A2P05997 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL5A2P05997 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.34■■□□□ 1.97
COL5A2P05997 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL5A2P05997 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC27.34■■□□□ 1.97
COL5A2P05997 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL5A2P05997 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC27.33■■□□□ 1.97
COL5A2P05997 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL5A2P05997 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.33■■□□□ 1.96
COL5A2P05997 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
COL5A2P05997 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.32■■□□□ 1.96
COL5A2P05997 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC27.32■■□□□ 1.96
COL5A2P05997 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
COL5A2P05997 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC27.32■■□□□ 1.96
COL5A2P05997 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.32■■□□□ 1.96
COL5A2P05997 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.32■■□□□ 1.96
COL5A2P05997 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.32■■□□□ 1.96
COL5A2P05997 KRT18P35-201ENST00000510488 1269 ntBASIC27.32■■□□□ 1.96
COL5A2P05997 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.32■■□□□ 1.96
COL5A2P05997 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL5A2P05997 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.31■■□□□ 1.96
COL5A2P05997 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL5A2P05997 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL5A2P05997 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL5A2P05997 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL5A2P05997 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
COL5A2P05997 PGM5P4-201ENST00000421970 445 ntBASIC27.31■■□□□ 1.96
COL5A2P05997 AP003071.4-201ENST00000562276 1284 ntBASIC27.31■■□□□ 1.96
COL5A2P05997 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
COL5A2P05997 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC27.31■■□□□ 1.96
COL5A2P05997 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL5A2P05997 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL5A2P05997 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC27.3■■□□□ 1.96
COL5A2P05997 Six3os1_6.1-201ENST00000620790 196 ntBASIC27.3■■□□□ 1.96
COL5A2P05997 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL5A2P05997 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC27.3■■□□□ 1.96
COL5A2P05997 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
COL5A2P05997 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
COL5A2P05997 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC27.29■■□□□ 1.96
COL5A2P05997 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC27.29■■□□□ 1.96
COL5A2P05997 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL5A2P05997 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
COL5A2P05997 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL5A2P05997 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL5A2P05997 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL5A2P05997 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC27.28■■□□□ 1.96
COL5A2P05997 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC27.28■■□□□ 1.96
COL5A2P05997 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC27.28■■□□□ 1.96
COL5A2P05997 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL5A2P05997 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.28■■□□□ 1.96
COL5A2P05997 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
COL5A2P05997 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
COL5A2P05997 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
COL5A2P05997 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL5A2P05997 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
COL5A2P05997 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL5A2P05997 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
COL5A2P05997 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL5A2P05997 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL5A2P05997 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC27.27■■□□□ 1.96
COL5A2P05997 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
COL5A2P05997 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL5A2P05997 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL5A2P05997 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms