Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.37■□□□□ 0.85
PCCBP05166 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.37■□□□□ 0.85
PCCBP05166 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
PCCBP05166 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCCBP05166 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PCCBP05166 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.37■□□□□ 0.85
PCCBP05166 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCCBP05166 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.36■□□□□ 0.85
PCCBP05166 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.36■□□□□ 0.85
PCCBP05166 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.36■□□□□ 0.85
PCCBP05166 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.36■□□□□ 0.85
PCCBP05166 AC105020.6-201ENST00000621523 1217 ntBASIC20.36■□□□□ 0.85
PCCBP05166 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.36■□□□□ 0.85
PCCBP05166 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCCBP05166 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.36■□□□□ 0.85
PCCBP05166 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCCBP05166 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCCBP05166 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCCBP05166 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PCCBP05166 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCCBP05166 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.35■□□□□ 0.85
PCCBP05166 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.35■□□□□ 0.85
PCCBP05166 AL049796.1-201ENST00000565336 1766 ntBASIC20.35■□□□□ 0.85
PCCBP05166 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.35■□□□□ 0.85
PCCBP05166 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCCBP05166 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.35■□□□□ 0.85
PCCBP05166 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCCBP05166 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.34■□□□□ 0.85
PCCBP05166 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCCBP05166 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.34■□□□□ 0.85
PCCBP05166 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCCBP05166 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.34■□□□□ 0.85
PCCBP05166 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.34■□□□□ 0.85
PCCBP05166 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.34■□□□□ 0.85
PCCBP05166 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCCBP05166 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCCBP05166 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.34■□□□□ 0.85
PCCBP05166 AF106564.1-201ENST00000607058 2553 ntBASIC20.34■□□□□ 0.85
PCCBP05166 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCCBP05166 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PCCBP05166 AC011484.1-201ENST00000377652 1995 ntBASIC20.34■□□□□ 0.85
PCCBP05166 FEM1AP4-201ENST00000443167 1987 ntBASIC20.34■□□□□ 0.85
PCCBP05166 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCCBP05166 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCCBP05166 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCCBP05166 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCCBP05166 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCCBP05166 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.33■□□□□ 0.85
PCCBP05166 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.33■□□□□ 0.85
PCCBP05166 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.33■□□□□ 0.85
PCCBP05166 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.33■□□□□ 0.85
PCCBP05166 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.33■□□□□ 0.85
PCCBP05166 AC087633.2-202ENST00000565166 1439 ntBASIC20.33■□□□□ 0.84
PCCBP05166 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.33■□□□□ 0.84
PCCBP05166 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.33■□□□□ 0.84
PCCBP05166 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.33■□□□□ 0.84
PCCBP05166 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
PCCBP05166 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCCBP05166 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCCBP05166 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
PCCBP05166 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.32■□□□□ 0.84
PCCBP05166 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.32■□□□□ 0.84
PCCBP05166 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms