Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGN1P05114 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HMGN1P05114 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGN1P05114 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 AC092720.2-201ENST00000602388 1665 ntBASIC18.55■□□□□ 0.56
HMGN1P05114 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 POU5F1P4-201ENST00000413175 1085 ntBASIC18.55■□□□□ 0.56
HMGN1P05114 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 AC008175.2-201ENST00000612840 297 ntBASIC18.55■□□□□ 0.56
HMGN1P05114 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGN1P05114 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.55■□□□□ 0.56
HMGN1P05114 PCDHAC2-203ENST00000615316 3011 ntBASIC18.55■□□□□ 0.56
HMGN1P05114 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGN1P05114 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGN1P05114 AC099778.1-201ENST00000568593 1911 ntBASIC18.55■□□□□ 0.56
HMGN1P05114 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
HMGN1P05114 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGN1P05114 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HMGN1P05114 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HMGN1P05114 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGN1P05114 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.54■□□□□ 0.56
HMGN1P05114 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.54■□□□□ 0.56
HMGN1P05114 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGN1P05114 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HMGN1P05114 AFG3L1P-217ENST00000557444 2447 ntBASIC18.54■□□□□ 0.56
HMGN1P05114 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGN1P05114 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGN1P05114 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGN1P05114 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGN1P05114 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGN1P05114 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGN1P05114 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HMGN1P05114 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGN1P05114 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.53■□□□□ 0.56
HMGN1P05114 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGN1P05114 AC007952.6-201ENST00000573168 2673 ntBASIC18.53■□□□□ 0.56
HMGN1P05114 AC003957.1-201ENST00000625108 2673 ntBASIC18.53■□□□□ 0.56
HMGN1P05114 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
HMGN1P05114 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGN1P05114 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGN1P05114 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGN1P05114 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGN1P05114 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGN1P05114 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGN1P05114 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HMGN1P05114 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HMGN1P05114 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGN1P05114 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGN1P05114 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGN1P05114 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGN1P05114 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.52■□□□□ 0.56
HMGN1P05114 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGN1P05114 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HMGN1P05114 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGN1P05114 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGN1P05114 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.52■□□□□ 0.55
HMGN1P05114 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.52■□□□□ 0.55
HMGN1P05114 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.52■□□□□ 0.55
HMGN1P05114 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGN1P05114 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGN1P05114 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGN1P05114 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms