Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
APPP05067 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
APPP05067 BX276092.2-201ENST00000417668 665 ntBASIC24.59■■□□□ 1.53
APPP05067 AL355472.2-201ENST00000422958 438 ntBASIC24.59■■□□□ 1.53
APPP05067 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
APPP05067 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.59■■□□□ 1.53
APPP05067 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.59■■□□□ 1.53
APPP05067 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
APPP05067 AL138781.1-201ENST00000566567 1274 ntBASIC24.59■■□□□ 1.53
APPP05067 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.59■■□□□ 1.53
APPP05067 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.59■■□□□ 1.53
APPP05067 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.59■■□□□ 1.53
APPP05067 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
APPP05067 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.59■■□□□ 1.53
APPP05067 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
APPP05067 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
APPP05067 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
APPP05067 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
APPP05067 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
APPP05067 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.58■■□□□ 1.53
APPP05067 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.58■■□□□ 1.53
APPP05067 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
APPP05067 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.58■■□□□ 1.53
APPP05067 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.58■■□□□ 1.53
APPP05067 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
APPP05067 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
APPP05067 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.58■■□□□ 1.53
APPP05067 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
APPP05067 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.58■■□□□ 1.52
APPP05067 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.58■■□□□ 1.52
APPP05067 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
APPP05067 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
APPP05067 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
APPP05067 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
APPP05067 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.52
APPP05067 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.57■■□□□ 1.52
APPP05067 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
APPP05067 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
APPP05067 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.57■■□□□ 1.52
APPP05067 MIPEPP3-201ENST00000412105 444 ntBASIC24.57■■□□□ 1.52
APPP05067 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.57■■□□□ 1.52
APPP05067 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
APPP05067 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
APPP05067 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.57■■□□□ 1.52
APPP05067 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
APPP05067 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
APPP05067 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
APPP05067 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.56■■□□□ 1.52
APPP05067 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
APPP05067 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.56■■□□□ 1.52
APPP05067 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.56■■□□□ 1.52
APPP05067 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
APPP05067 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
APPP05067 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.56■■□□□ 1.52
APPP05067 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 PLK5-205ENST00000642079 1969 ntBASIC24.55■■□□□ 1.52
APPP05067 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.55■■□□□ 1.52
APPP05067 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.55■■□□□ 1.52
APPP05067 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
APPP05067 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.55■■□□□ 1.52
APPP05067 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.54■■□□□ 1.52
APPP05067 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.54■■□□□ 1.52
APPP05067 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
APPP05067 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.54■■□□□ 1.52
APPP05067 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
APPP05067 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
APPP05067 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.54■■□□□ 1.52
APPP05067 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
APPP05067 MCRIP2P1-201ENST00000394346 511 ntBASIC24.54■■□□□ 1.52
APPP05067 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.54■■□□□ 1.52
APPP05067 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.54■■□□□ 1.52
APPP05067 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.54■■□□□ 1.52
APPP05067 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.54■■□□□ 1.52
APPP05067 AC100791.3-201ENST00000617619 330 ntBASIC24.54■■□□□ 1.52
APPP05067 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
APPP05067 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.54■■□□□ 1.52
APPP05067 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
APPP05067 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
APPP05067 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.54■■□□□ 1.52
APPP05067 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
APPP05067 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms