Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LMNAP02545 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
LMNAP02545 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LMNAP02545 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LMNAP02545 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 AC080038.3-201ENST00000623346 1952 ntBASIC21.34■■□□□ 1.01
LMNAP02545 LINC01521-201ENST00000504184 1943 ntBASIC21.34■■□□□ 1.01
LMNAP02545 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.34■■□□□ 1.01
LMNAP02545 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.34■■□□□ 1.01
LMNAP02545 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.34■■□□□ 1.01
LMNAP02545 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.34■■□□□ 1.01
LMNAP02545 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.34■■□□□ 1.01
LMNAP02545 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LMNAP02545 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMNAP02545 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMNAP02545 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.33■■□□□ 1.01
LMNAP02545 RNF165-205ENST00000588679 2904 ntBASIC21.33■■□□□ 1.01
LMNAP02545 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMNAP02545 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.33■■□□□ 1.01
LMNAP02545 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LMNAP02545 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LMNAP02545 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LMNAP02545 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMNAP02545 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
LMNAP02545 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
LMNAP02545 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.33■■□□□ 1.01
LMNAP02545 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.33■■□□□ 1.01
LMNAP02545 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LMNAP02545 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.33■■□□□ 1.01
LMNAP02545 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.33■■□□□ 1.01
LMNAP02545 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.33■■□□□ 1.01
LMNAP02545 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.33■■□□□ 1.01
LMNAP02545 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.33■■□□□ 1
LMNAP02545 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LMNAP02545 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.33■■□□□ 1
LMNAP02545 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.33■■□□□ 1
LMNAP02545 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.32■■□□□ 1
LMNAP02545 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.32■■□□□ 1
LMNAP02545 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.32■■□□□ 1
LMNAP02545 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.32■■□□□ 1
LMNAP02545 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
LMNAP02545 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.32■■□□□ 1
LMNAP02545 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LMNAP02545 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LMNAP02545 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.32■■□□□ 1
LMNAP02545 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LMNAP02545 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.32■■□□□ 1
LMNAP02545 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.32■■□□□ 1
LMNAP02545 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LMNAP02545 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMNAP02545 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LMNAP02545 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.31■■□□□ 1
LMNAP02545 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 SNORA78-201ENST00000459373 127 ntBASIC21.31■■□□□ 1
LMNAP02545 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.31■■□□□ 1
LMNAP02545 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LMNAP02545 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LMNAP02545 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.31■■□□□ 1
LMNAP02545 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMNAP02545 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.3■■□□□ 1
LMNAP02545 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMNAP02545 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LMNAP02545 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LMNAP02545 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
LMNAP02545 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.3■■□□□ 1
LMNAP02545 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMNAP02545 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.3■■□□□ 1
LMNAP02545 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.3■■□□□ 1
LMNAP02545 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.3■■□□□ 1
LMNAP02545 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.3■■□□□ 1
LMNAP02545 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.3■■□□□ 1
LMNAP02545 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMNAP02545 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms