Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRP01130 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRP01130 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRP01130 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.74■□□□□ 0.75
LDLRP01130 AC073314.1-201ENST00000568729 2216 ntBASIC19.74■□□□□ 0.75
LDLRP01130 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LDLRP01130 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LDLRP01130 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.73■□□□□ 0.75
LDLRP01130 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 AC006128.1-201ENST00000624704 1661 ntBASIC19.73■□□□□ 0.75
LDLRP01130 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.73■□□□□ 0.75
LDLRP01130 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.73■□□□□ 0.75
LDLRP01130 TSPY20P-201ENST00000450910 630 ntBASIC19.73■□□□□ 0.75
LDLRP01130 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.73■□□□□ 0.75
LDLRP01130 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LDLRP01130 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LDLRP01130 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRP01130 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LDLRP01130 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LDLRP01130 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 GPX1P1-201ENST00000388829 606 ntBASIC19.72■□□□□ 0.75
LDLRP01130 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 TPRG1LP1-201ENST00000598702 760 ntBASIC19.72■□□□□ 0.75
LDLRP01130 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 AC004854.2-201ENST00000608450 1441 ntBASIC19.72■□□□□ 0.75
LDLRP01130 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.72■□□□□ 0.75
LDLRP01130 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRP01130 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.72■□□□□ 0.75
LDLRP01130 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
LDLRP01130 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
LDLRP01130 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LDLRP01130 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.71■□□□□ 0.75
LDLRP01130 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.71■□□□□ 0.75
LDLRP01130 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 MIR663A-201ENST00000385250 93 ntBASIC19.71■□□□□ 0.75
LDLRP01130 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.71■□□□□ 0.75
LDLRP01130 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
LDLRP01130 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LDLRP01130 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRP01130 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
LDLRP01130 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.7■□□□□ 0.74
LDLRP01130 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRP01130 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRP01130 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRP01130 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.7■□□□□ 0.74
LDLRP01130 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRP01130 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LDLRP01130 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRP01130 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRP01130 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRP01130 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.7■□□□□ 0.74
LDLRP01130 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
LDLRP01130 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRP01130 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRP01130 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LDLRP01130 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LDLRP01130 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRP01130 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRP01130 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.69■□□□□ 0.74
LDLRP01130 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRP01130 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 AL391422.3-201ENST00000603791 2761 ntBASIC19.69■□□□□ 0.74
LDLRP01130 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LDLRP01130 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
LDLRP01130 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.69■□□□□ 0.74
LDLRP01130 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRP01130 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRP01130 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.69■□□□□ 0.74
LDLRP01130 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms