Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MT-CO1P00395 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO1P00395 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.02■□□□□ 0.96
MT-CO1P00395 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-CO1P00395 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MT-CO1P00395 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO1P00395 FEM1AP4-201ENST00000443167 1987 ntBASIC21.02■□□□□ 0.96
MT-CO1P00395 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
MT-CO1P00395 AC116050.2-201ENST00000612102 1779 ntBASIC21.02■□□□□ 0.96
MT-CO1P00395 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO1P00395 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MT-CO1P00395 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MT-CO1P00395 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MT-CO1P00395 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.01■□□□□ 0.95
MT-CO1P00395 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.01■□□□□ 0.95
MT-CO1P00395 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.01■□□□□ 0.95
MT-CO1P00395 BX276092.2-201ENST00000417668 665 ntBASIC21.01■□□□□ 0.95
MT-CO1P00395 AL355472.2-201ENST00000422958 438 ntBASIC21.01■□□□□ 0.95
MT-CO1P00395 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.01■□□□□ 0.95
MT-CO1P00395 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.01■□□□□ 0.95
MT-CO1P00395 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.01■□□□□ 0.95
MT-CO1P00395 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.01■□□□□ 0.95
MT-CO1P00395 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.01■□□□□ 0.95
MT-CO1P00395 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO1P00395 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21■□□□□ 0.95
MT-CO1P00395 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-CO1P00395 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-CO1P00395 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
MT-CO1P00395 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21■□□□□ 0.95
MT-CO1P00395 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-CO1P00395 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-CO1P00395 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-CO1P00395 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21■□□□□ 0.95
MT-CO1P00395 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21■□□□□ 0.95
MT-CO1P00395 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21■□□□□ 0.95
MT-CO1P00395 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
MT-CO1P00395 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21■□□□□ 0.95
MT-CO1P00395 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-CO1P00395 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO1P00395 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO1P00395 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO1P00395 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.99■□□□□ 0.95
MT-CO1P00395 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO1P00395 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
MT-CO1P00395 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.99■□□□□ 0.95
MT-CO1P00395 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.99■□□□□ 0.95
MT-CO1P00395 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.99■□□□□ 0.95
MT-CO1P00395 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.99■□□□□ 0.95
MT-CO1P00395 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO1P00395 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO1P00395 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MT-CO1P00395 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO1P00395 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO1P00395 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MT-CO1P00395 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.98■□□□□ 0.95
MT-CO1P00395 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MT-CO1P00395 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MT-CO1P00395 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO1P00395 AC069152.1-201ENST00000438030 544 ntBASIC20.98■□□□□ 0.95
MT-CO1P00395 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.98■□□□□ 0.95
MT-CO1P00395 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
MT-CO1P00395 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.98■□□□□ 0.95
MT-CO1P00395 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO1P00395 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO1P00395 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO1P00395 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-CO1P00395 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MT-CO1P00395 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MT-CO1P00395 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.97■□□□□ 0.95
MT-CO1P00395 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.97■□□□□ 0.95
MT-CO1P00395 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.97■□□□□ 0.95
MT-CO1P00395 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.97■□□□□ 0.95
MT-CO1P00395 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.97■□□□□ 0.95
MT-CO1P00395 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.97■□□□□ 0.95
MT-CO1P00395 MIR4758-201ENST00000577688 71 ntBASIC20.97■□□□□ 0.95
MT-CO1P00395 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO1P00395 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.97■□□□□ 0.95
MT-CO1P00395 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO1P00395 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO1P00395 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO1P00395 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.97■□□□□ 0.95
MT-CO1P00395 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-CO1P00395 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO1P00395 AL049796.1-201ENST00000565336 1766 ntBASIC20.97■□□□□ 0.95
MT-CO1P00395 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-CO1P00395 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms