Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCF11O94913 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC32.24■■■□□ 2.75
PCF11O94913 AC244015.2-201ENST00000616358 1861 ntBASIC32.24■■■□□ 2.75
PCF11O94913 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC32.24■■■□□ 2.75
PCF11O94913 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PCF11O94913 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCF11O94913 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCF11O94913 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC32.24■■■□□ 2.75
PCF11O94913 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
PCF11O94913 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCF11O94913 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCF11O94913 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC32.24■■■□□ 2.75
PCF11O94913 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC32.24■■■□□ 2.75
PCF11O94913 REXO2-208ENST00000539754 791 ntTSL 2 BASIC32.24■■■□□ 2.75
PCF11O94913 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC32.24■■■□□ 2.75
PCF11O94913 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC32.23■■■□□ 2.75
PCF11O94913 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC32.23■■■□□ 2.75
PCF11O94913 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 PGM5P4-201ENST00000421970 445 ntBASIC32.23■■■□□ 2.75
PCF11O94913 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC32.23■■■□□ 2.75
PCF11O94913 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC32.23■■■□□ 2.75
PCF11O94913 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PCF11O94913 DYM-203ENST00000442713 2147 ntTSL 2 BASIC32.22■■■□□ 2.75
PCF11O94913 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
PCF11O94913 RPPH1-201ENST00000516869 333 ntBASIC32.22■■■□□ 2.75
PCF11O94913 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCF11O94913 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC32.22■■■□□ 2.75
PCF11O94913 C2orf69P4-201ENST00000565394 541 ntBASIC32.22■■■□□ 2.75
PCF11O94913 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC32.22■■■□□ 2.75
PCF11O94913 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCF11O94913 MYB-221ENST00000527615 2381 ntTSL 5 BASIC32.22■■■□□ 2.75
PCF11O94913 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCF11O94913 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCF11O94913 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC32.21■■■□□ 2.75
PCF11O94913 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PCF11O94913 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCF11O94913 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCF11O94913 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PCF11O94913 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC32.21■■■□□ 2.75
PCF11O94913 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
PCF11O94913 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC32.2■■■□□ 2.75
PCF11O94913 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
PCF11O94913 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PCF11O94913 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
PCF11O94913 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
PCF11O94913 AC211429.1-201ENST00000415277 523 ntBASIC32.19■■■□□ 2.74
PCF11O94913 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PCF11O94913 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCF11O94913 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PCF11O94913 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC32.19■■■□□ 2.74
PCF11O94913 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC32.19■■■□□ 2.74
PCF11O94913 MIR4497-201ENST00000583208 89 ntBASIC32.19■■■□□ 2.74
PCF11O94913 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC32.19■■■□□ 2.74
PCF11O94913 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCF11O94913 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC32.19■■■□□ 2.74
PCF11O94913 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCF11O94913 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC32.19■■■□□ 2.74
PCF11O94913 MME-217ENST00000616757 1315 ntTSL 5 BASIC32.19■■■□□ 2.74
PCF11O94913 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PCF11O94913 KRT18P21-201ENST00000515767 1272 ntBASIC32.19■■■□□ 2.74
PCF11O94913 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCF11O94913 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
PCF11O94913 AL117328.2-201ENST00000624617 1940 ntBASIC32.18■■■□□ 2.74
PCF11O94913 Z98882.1-201ENST00000622160 2253 ntBASIC32.18■■■□□ 2.74
PCF11O94913 NXN-202ENST00000537628 1340 ntTSL 3 BASIC32.18■■■□□ 2.74
PCF11O94913 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCF11O94913 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCF11O94913 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC32.18■■■□□ 2.74
PCF11O94913 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PCF11O94913 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC32.18■■■□□ 2.74
PCF11O94913 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PCF11O94913 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PCF11O94913 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC32.17■■■□□ 2.74
PCF11O94913 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PCF11O94913 SERF2-207ENST00000409614 582 ntTSL 2 BASIC32.17■■■□□ 2.74
PCF11O94913 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC32.17■■■□□ 2.74
PCF11O94913 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PCF11O94913 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC32.17■■■□□ 2.74
PCF11O94913 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PCF11O94913 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
PCF11O94913 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PCF11O94913 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
PCF11O94913 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
PCF11O94913 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC32.16■■■□□ 2.74
PCF11O94913 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
PCF11O94913 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
PCF11O94913 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC32.16■■■□□ 2.74
PCF11O94913 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC32.16■■■□□ 2.74
PCF11O94913 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC32.16■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms