Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
USH2AO75445 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 MIR1238-201ENST00000408483 83 ntBASIC9.27□□□□□ -0.93
USH2AO75445 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC9.27□□□□□ -0.93
USH2AO75445 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
USH2AO75445 VMO1-204ENST00000441199 741 ntTSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
USH2AO75445 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC9.26□□□□□ -0.93
USH2AO75445 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC9.26□□□□□ -0.93
USH2AO75445 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
USH2AO75445 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC9.26□□□□□ -0.93
USH2AO75445 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
USH2AO75445 AL358472.4-201ENST00000633140 710 ntBASIC9.26□□□□□ -0.93
USH2AO75445 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 LTK-203ENST00000453182 2412 ntTSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC9.26□□□□□ -0.93
USH2AO75445 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
USH2AO75445 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC9.26□□□□□ -0.93
USH2AO75445 AC246785.2-201ENST00000432512 513 ntBASIC9.26□□□□□ -0.93
USH2AO75445 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
USH2AO75445 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC9.26□□□□□ -0.93
USH2AO75445 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.93
USH2AO75445 AC091076.1-201ENST00000610741 619 ntBASIC9.26□□□□□ -0.93
USH2AO75445 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
USH2AO75445 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC9.25□□□□□ -0.93
USH2AO75445 NDUFV2-AS1-203ENST00000608008 779 ntBASIC9.25□□□□□ -0.93
USH2AO75445 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC9.25□□□□□ -0.93
USH2AO75445 AC139530.3-201ENST00000620344 690 ntBASIC9.25□□□□□ -0.93
USH2AO75445 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
USH2AO75445 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 AL671883.3-201ENST00000603274 991 ntBASIC9.25□□□□□ -0.93
USH2AO75445 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC9.25□□□□□ -0.93
USH2AO75445 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
USH2AO75445 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
USH2AO75445 LINC00526-201ENST00000581067 1875 ntBASIC9.25□□□□□ -0.93
USH2AO75445 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
USH2AO75445 MOK-233ENST00000524214 1539 ntTSL 2 BASIC9.25□□□□□ -0.93
USH2AO75445 AC027702.1-201ENST00000563810 1770 ntBASIC9.25□□□□□ -0.93
USH2AO75445 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC9.25□□□□□ -0.93
USH2AO75445 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
USH2AO75445 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC9.24□□□□□ -0.93
USH2AO75445 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC9.24□□□□□ -0.93
USH2AO75445 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
USH2AO75445 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 AL359075.1-203ENST00000462729 1002 ntBASIC9.24□□□□□ -0.93
USH2AO75445 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
USH2AO75445 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
USH2AO75445 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC9.24□□□□□ -0.93
USH2AO75445 AK4P3-201ENST00000418260 669 ntBASIC9.24□□□□□ -0.93
USH2AO75445 CD320-202ENST00000537716 1119 ntTSL 2 BASIC9.24□□□□□ -0.93
USH2AO75445 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
USH2AO75445 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
USH2AO75445 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC9.24□□□□□ -0.93
USH2AO75445 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
USH2AO75445 AC117947.1-201ENST00000427448 529 ntBASIC9.24□□□□□ -0.93
USH2AO75445 AC079089.2-201ENST00000531211 1277 ntBASIC9.24□□□□□ -0.93
USH2AO75445 AC004264.1-201ENST00000608354 794 ntBASIC9.24□□□□□ -0.93
USH2AO75445 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
USH2AO75445 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
USH2AO75445 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms