Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 Z98882.1-201ENST00000622160 2253 ntBASIC19.09■□□□□ 0.65
TRIM3O75382 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM3O75382 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 RBM17P2-201ENST00000616397 1405 ntBASIC19.08■□□□□ 0.65
TRIM3O75382 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRIM3O75382 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM3O75382 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRIM3O75382 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM3O75382 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM3O75382 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM3O75382 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRIM3O75382 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM3O75382 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.08■□□□□ 0.65
TRIM3O75382 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM3O75382 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM3O75382 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM3O75382 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM3O75382 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM3O75382 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM3O75382 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM3O75382 AC005181.1-201ENST00000604782 1256 ntBASIC19.08■□□□□ 0.64
TRIM3O75382 AC243732.1-201ENST00000612648 864 ntBASIC19.08■□□□□ 0.64
TRIM3O75382 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.08■□□□□ 0.64
TRIM3O75382 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM3O75382 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM3O75382 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM3O75382 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.07■□□□□ 0.64
TRIM3O75382 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.07■□□□□ 0.64
TRIM3O75382 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM3O75382 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 AL050303.2-201ENST00000619798 666 ntBASIC19.07■□□□□ 0.64
TRIM3O75382 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM3O75382 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM3O75382 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM3O75382 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM3O75382 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM3O75382 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM3O75382 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM3O75382 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM3O75382 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM3O75382 NCF1B-203ENST00000435988 1254 ntBASIC19.06■□□□□ 0.64
TRIM3O75382 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM3O75382 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM3O75382 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM3O75382 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TRIM3O75382 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM3O75382 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM3O75382 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRIM3O75382 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRIM3O75382 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM3O75382 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM3O75382 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM3O75382 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM3O75382 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM3O75382 AC068338.2-201ENST00000563278 1430 ntBASIC19.05■□□□□ 0.64
TRIM3O75382 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM3O75382 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM3O75382 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM3O75382 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM3O75382 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 HLA-L-209ENST00000420110 1011 ntBASIC19.04■□□□□ 0.64
TRIM3O75382 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM3O75382 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM3O75382 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM3O75382 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM3O75382 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
TRIM3O75382 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM3O75382 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM3O75382 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms