Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCL13O43927 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CXCL13O43927 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CXCL13O43927 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CXCL13O43927 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.39■□□□□ 0.53
CXCL13O43927 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCL13O43927 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CXCL13O43927 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCL13O43927 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL13O43927 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.38■□□□□ 0.53
CXCL13O43927 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL13O43927 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CXCL13O43927 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.38■□□□□ 0.53
CXCL13O43927 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCL13O43927 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.38■□□□□ 0.53
CXCL13O43927 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL13O43927 AC142086.2-201ENST00000569753 217 ntBASIC18.38■□□□□ 0.53
CXCL13O43927 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL13O43927 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.38■□□□□ 0.53
CXCL13O43927 CYP2T3P-201ENST00000601990 817 ntBASIC18.38■□□□□ 0.53
CXCL13O43927 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.38■□□□□ 0.53
CXCL13O43927 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL13O43927 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCL13O43927 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL13O43927 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCL13O43927 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL13O43927 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CXCL13O43927 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 AC098934.4-201ENST00000564127 592 ntBASIC18.37■□□□□ 0.53
CXCL13O43927 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCL13O43927 MIR4758-201ENST00000577688 71 ntBASIC18.37■□□□□ 0.53
CXCL13O43927 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CXCL13O43927 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCL13O43927 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCL13O43927 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.37■□□□□ 0.53
CXCL13O43927 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CXCL13O43927 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CXCL13O43927 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CXCL13O43927 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCL13O43927 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL13O43927 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CXCL13O43927 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
CXCL13O43927 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 KRT17P1-201ENST00000399211 1546 ntBASIC18.36■□□□□ 0.53
CXCL13O43927 LSM12P1-201ENST00000411836 588 ntBASIC18.36■□□□□ 0.53
CXCL13O43927 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL13O43927 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.36■□□□□ 0.53
CXCL13O43927 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.36■□□□□ 0.53
CXCL13O43927 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CXCL13O43927 PLK5-205ENST00000642079 1969 ntBASIC18.36■□□□□ 0.53
CXCL13O43927 AL137060.1-201ENST00000618151 2648 ntBASIC18.36■□□□□ 0.53
CXCL13O43927 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.35■□□□□ 0.53
CXCL13O43927 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCL13O43927 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CXCL13O43927 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.35■□□□□ 0.53
CXCL13O43927 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 KRT18P68-201ENST00000392293 1000 ntBASIC18.35■□□□□ 0.53
CXCL13O43927 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CXCL13O43927 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.35■□□□□ 0.53
CXCL13O43927 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCL13O43927 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.35■□□□□ 0.53
CXCL13O43927 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.35■□□□□ 0.53
CXCL13O43927 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.35■□□□□ 0.53
CXCL13O43927 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CXCL13O43927 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms