Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.53■■□□□ 1.68
SRGAP3O43295 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.53■■□□□ 1.68
SRGAP3O43295 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.53■■□□□ 1.68
SRGAP3O43295 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.53■■□□□ 1.68
SRGAP3O43295 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.53■■□□□ 1.68
SRGAP3O43295 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.53■■□□□ 1.68
SRGAP3O43295 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRGAP3O43295 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.52■■□□□ 1.68
SRGAP3O43295 AC006128.1-201ENST00000624704 1661 ntBASIC25.52■■□□□ 1.68
SRGAP3O43295 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.52■■□□□ 1.68
SRGAP3O43295 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SRGAP3O43295 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRGAP3O43295 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.52■■□□□ 1.68
SRGAP3O43295 AC142086.2-201ENST00000569753 217 ntBASIC25.52■■□□□ 1.68
SRGAP3O43295 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.52■■□□□ 1.68
SRGAP3O43295 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.52■■□□□ 1.68
SRGAP3O43295 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
SRGAP3O43295 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRGAP3O43295 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRGAP3O43295 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SRGAP3O43295 KRT17P1-201ENST00000399211 1546 ntBASIC25.52■■□□□ 1.68
SRGAP3O43295 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SRGAP3O43295 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRGAP3O43295 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.51■■□□□ 1.67
SRGAP3O43295 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.51■■□□□ 1.67
SRGAP3O43295 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SRGAP3O43295 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SRGAP3O43295 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.51■■□□□ 1.67
SRGAP3O43295 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SRGAP3O43295 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.51■■□□□ 1.67
SRGAP3O43295 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.51■■□□□ 1.67
SRGAP3O43295 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SRGAP3O43295 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SRGAP3O43295 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SRGAP3O43295 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SRGAP3O43295 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SRGAP3O43295 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SRGAP3O43295 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.5■■□□□ 1.67
SRGAP3O43295 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SRGAP3O43295 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.5■■□□□ 1.67
SRGAP3O43295 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.5■■□□□ 1.67
SRGAP3O43295 AC098934.4-201ENST00000564127 592 ntBASIC25.5■■□□□ 1.67
SRGAP3O43295 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.5■■□□□ 1.67
SRGAP3O43295 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
SRGAP3O43295 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.5■■□□□ 1.67
SRGAP3O43295 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.49■■□□□ 1.67
SRGAP3O43295 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.49■■□□□ 1.67
SRGAP3O43295 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRGAP3O43295 AC087633.2-202ENST00000565166 1439 ntBASIC25.49■■□□□ 1.67
SRGAP3O43295 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.49■■□□□ 1.67
SRGAP3O43295 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.49■■□□□ 1.67
SRGAP3O43295 KRT18P68-201ENST00000392293 1000 ntBASIC25.49■■□□□ 1.67
SRGAP3O43295 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.49■■□□□ 1.67
SRGAP3O43295 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SRGAP3O43295 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.49■■□□□ 1.67
SRGAP3O43295 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SRGAP3O43295 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.49■■□□□ 1.67
SRGAP3O43295 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRGAP3O43295 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRGAP3O43295 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRGAP3O43295 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
SRGAP3O43295 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
SRGAP3O43295 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.49■■□□□ 1.67
SRGAP3O43295 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRGAP3O43295 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SRGAP3O43295 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SRGAP3O43295 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SRGAP3O43295 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SRGAP3O43295 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
SRGAP3O43295 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.48■■□□□ 1.67
SRGAP3O43295 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SRGAP3O43295 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.47■■□□□ 1.67
SRGAP3O43295 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.47■■□□□ 1.67
SRGAP3O43295 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.47■■□□□ 1.67
SRGAP3O43295 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.47■■□□□ 1.67
SRGAP3O43295 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.47■■□□□ 1.67
SRGAP3O43295 AC092118.2-201ENST00000613495 667 ntBASIC25.47■■□□□ 1.67
SRGAP3O43295 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
SRGAP3O43295 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.47■■□□□ 1.67
SRGAP3O43295 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
SRGAP3O43295 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.47■■□□□ 1.67
SRGAP3O43295 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.47■■□□□ 1.67
SRGAP3O43295 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SRGAP3O43295 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms