Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 AP006587.3-201ENST00000525742 1516 ntBASIC19.41■□□□□ 0.7
CLOCKO15516 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
CLOCKO15516 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CLOCKO15516 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLOCKO15516 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLOCKO15516 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.41■□□□□ 0.7
CLOCKO15516 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.41■□□□□ 0.7
CLOCKO15516 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.41■□□□□ 0.7
CLOCKO15516 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.41■□□□□ 0.7
CLOCKO15516 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.41■□□□□ 0.7
CLOCKO15516 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLOCKO15516 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.41■□□□□ 0.7
CLOCKO15516 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLOCKO15516 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLOCKO15516 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLOCKO15516 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.41■□□□□ 0.7
CLOCKO15516 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLOCKO15516 AL512408.1-201ENST00000569378 2000 ntBASIC19.41■□□□□ 0.7
CLOCKO15516 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLOCKO15516 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.4■□□□□ 0.7
CLOCKO15516 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.4■□□□□ 0.7
CLOCKO15516 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.4■□□□□ 0.7
CLOCKO15516 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.4■□□□□ 0.7
CLOCKO15516 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.4■□□□□ 0.7
CLOCKO15516 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLOCKO15516 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLOCKO15516 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CLOCKO15516 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLOCKO15516 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
CLOCKO15516 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLOCKO15516 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CLOCKO15516 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLOCKO15516 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CLOCKO15516 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.39■□□□□ 0.7
CLOCKO15516 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLOCKO15516 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.39■□□□□ 0.69
CLOCKO15516 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 AC233992.3-201ENST00000607491 485 ntBASIC19.39■□□□□ 0.69
CLOCKO15516 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLOCKO15516 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLOCKO15516 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CLOCKO15516 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLOCKO15516 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLOCKO15516 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLOCKO15516 SMG8-203ENST00000578922 2178 ntBASIC19.39■□□□□ 0.69
CLOCKO15516 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLOCKO15516 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLOCKO15516 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLOCKO15516 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.38■□□□□ 0.69
CLOCKO15516 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.38■□□□□ 0.69
CLOCKO15516 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLOCKO15516 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLOCKO15516 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CLOCKO15516 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.38■□□□□ 0.69
CLOCKO15516 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CLOCKO15516 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLOCKO15516 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms