Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TNRC18O15417 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
TNRC18O15417 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.7■■□□□ 1.22
TNRC18O15417 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.7■■□□□ 1.22
TNRC18O15417 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.69■■□□□ 1.22
TNRC18O15417 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNRC18O15417 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNRC18O15417 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TNRC18O15417 TSPY14P-201ENST00000303979 915 ntBASIC22.69■■□□□ 1.22
TNRC18O15417 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.69■■□□□ 1.22
TNRC18O15417 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.69■■□□□ 1.22
TNRC18O15417 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.69■■□□□ 1.22
TNRC18O15417 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNRC18O15417 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TNRC18O15417 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TNRC18O15417 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 LINC01960-201ENST00000563759 1884 ntBASIC22.68■■□□□ 1.22
TNRC18O15417 LINC00526-201ENST00000581067 1875 ntBASIC22.68■■□□□ 1.22
TNRC18O15417 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.68■■□□□ 1.22
TNRC18O15417 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
TNRC18O15417 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.68■■□□□ 1.22
TNRC18O15417 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 LINC02084-201ENST00000606069 1096 ntBASIC22.68■■□□□ 1.22
TNRC18O15417 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.68■■□□□ 1.22
TNRC18O15417 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.68■■□□□ 1.22
TNRC18O15417 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.68■■□□□ 1.22
TNRC18O15417 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
TNRC18O15417 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.68■■□□□ 1.22
TNRC18O15417 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
TNRC18O15417 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.68■■□□□ 1.22
TNRC18O15417 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNRC18O15417 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TNRC18O15417 RNF152P1-201ENST00000397754 604 ntBASIC22.67■■□□□ 1.22
TNRC18O15417 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TNRC18O15417 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.67■■□□□ 1.22
TNRC18O15417 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 AC142086.6-201ENST00000621154 1765 ntBASIC22.67■■□□□ 1.22
TNRC18O15417 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.67■■□□□ 1.22
TNRC18O15417 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.67■■□□□ 1.22
TNRC18O15417 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNRC18O15417 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.66■■□□□ 1.22
TNRC18O15417 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNRC18O15417 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.66■■□□□ 1.22
TNRC18O15417 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.66■■□□□ 1.22
TNRC18O15417 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.66■■□□□ 1.22
TNRC18O15417 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.66■■□□□ 1.22
TNRC18O15417 AC022898.2-201ENST00000616822 1312 ntBASIC22.66■■□□□ 1.22
TNRC18O15417 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.66■■□□□ 1.22
TNRC18O15417 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNRC18O15417 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TNRC18O15417 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNRC18O15417 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.66■■□□□ 1.22
TNRC18O15417 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNRC18O15417 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TNRC18O15417 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.66■■□□□ 1.22
TNRC18O15417 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TNRC18O15417 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNRC18O15417 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.65■■□□□ 1.22
TNRC18O15417 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.65■■□□□ 1.22
TNRC18O15417 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.65■■□□□ 1.22
TNRC18O15417 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 AL390719.1-204ENST00000412397 1219 ntBASIC22.65■■□□□ 1.22
TNRC18O15417 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNRC18O15417 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.65■■□□□ 1.22
TNRC18O15417 TSPY5P-201ENST00000426936 936 ntBASIC22.65■■□□□ 1.22
TNRC18O15417 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TNRC18O15417 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNRC18O15417 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNRC18O15417 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNRC18O15417 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.64■■□□□ 1.22
TNRC18O15417 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
TNRC18O15417 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNRC18O15417 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNRC18O15417 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNRC18O15417 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNRC18O15417 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNRC18O15417 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNRC18O15417 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
TNRC18O15417 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.63■■□□□ 1.21
TNRC18O15417 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TNRC18O15417 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms