Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
PCDH17O14917 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDH17O14917 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH17O14917 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDH17O14917 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDH17O14917 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH17O14917 LINC01521-201ENST00000504184 1943 ntBASIC19.55■□□□□ 0.72
PCDH17O14917 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH17O14917 ABHD17AP1-201ENST00000358206 933 ntBASIC19.55■□□□□ 0.72
PCDH17O14917 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 AC073210.2-201ENST00000430369 194 ntBASIC19.55■□□□□ 0.72
PCDH17O14917 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDH17O14917 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH17O14917 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.55■□□□□ 0.72
PCDH17O14917 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDH17O14917 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH17O14917 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH17O14917 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH17O14917 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH17O14917 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDH17O14917 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH17O14917 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH17O14917 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDH17O14917 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH17O14917 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDH17O14917 AC105036.2-201ENST00000569468 176 ntBASIC19.54■□□□□ 0.72
PCDH17O14917 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PCDH17O14917 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
PCDH17O14917 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH17O14917 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH17O14917 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH17O14917 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH17O14917 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH17O14917 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDH17O14917 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDH17O14917 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH17O14917 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDH17O14917 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH17O14917 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PCDH17O14917 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH17O14917 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PCDH17O14917 GUSBP6-202ENST00000438529 1198 ntBASIC19.52■□□□□ 0.72
PCDH17O14917 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH17O14917 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH17O14917 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH17O14917 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH17O14917 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH17O14917 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PCDH17O14917 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH17O14917 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH17O14917 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH17O14917 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
PCDH17O14917 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDH17O14917 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH17O14917 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 LINC01006-201ENST00000333319 2292 ntBASIC19.51■□□□□ 0.71
PCDH17O14917 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH17O14917 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDH17O14917 CDV3P1-201ENST00000471403 739 ntBASIC19.51■□□□□ 0.71
PCDH17O14917 AC133041.1-202ENST00000642053 222 ntBASIC19.51■□□□□ 0.71
PCDH17O14917 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms